RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 BATF2Q8N1L9 274 aa14.46□□□□□ -0.09
MRPL28-208ENST00000469744 GAPTQ8N292 157 aa14.46□□□□□ -0.09
MRPL28-208ENST00000469744 OR5T2Q8NGG2 359 aa14.46□□□□□ -0.09
MRPL28-208ENST00000469744 OR4A4PQ8NGN8 299 aa14.46□□□□□ -0.09
MRPL28-208ENST00000469744 NEK7Q8TDX7 302 aa14.46□□□□□ -0.09
MRPL28-208ENST00000469744 RTN4IP1Q8WWV3 396 aaPredicted RBP14.46□□□□□ -0.09
MRPL28-208ENST00000469744 TOMM40LQ969M1 308 aa14.46□□□□□ -0.09
MRPL28-208ENST00000469744 PHYHIPLQ96FC7 376 aa14.46□□□□□ -0.09
MRPL28-208ENST00000469744 RASL12Q9NYN1 266 aa14.46□□□□□ -0.09
MRPL28-208ENST00000469744 IL36RNQ9UBH0 155 aa14.46□□□□□ -0.09
MRPL28-208ENST00000469744 NDUFA2O43678 99 aa14.45□□□□□ -0.1
MRPL28-208ENST00000469744 PPIAL4GP0DN37 164 aa14.45□□□□□ -0.1
MRPL28-208ENST00000469744 KCNJ3P48549 501 aa14.45□□□□□ -0.1
MRPL28-208ENST00000469744 SRPXP78539 464 aa14.45□□□□□ -0.1
MRPL28-208ENST00000469744 FIP1L1Q6UN15 594 aaKnown RBP14.45□□□□□ -0.1
MRPL28-208ENST00000469744 LIAT1Q6ZQX7 453 aa14.45□□□□□ -0.1
MRPL28-208ENST00000469744 FAM216BQ8N7L0 139 aa14.45□□□□□ -0.1
MRPL28-208ENST00000469744 ST8SIA2Q92186 375 aa14.45□□□□□ -0.1
MRPL28-208ENST00000469744 OR10C1Q96KK4 312 aa14.45□□□□□ -0.1
MRPL28-208ENST00000469744 ZNF488Q96MN9 340 aa14.45□□□□□ -0.1
MRPL28-208ENST00000469744 HES4Q9HCC6 221 aa14.45□□□□□ -0.1
MRPL28-208ENST00000469744 SLC2A9Q9NRM0 540 aa14.45□□□□□ -0.1
MRPL28-208ENST00000469744 SRRM5B3KS81 715 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 NPIPB11E5RHQ5 1161 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 RRASP10301 218 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 SELLP14151 372 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 NUP62P37198 522 aaPredicted RBP14.44□□□□□ -0.1
MRPL28-208ENST00000469744 FXYD4P59646 89 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 RUSC1-AS1Q66K80 236 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 LGI3Q8N145 548 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 ARPC5LQ9BPX5 153 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 CABLES2Q9BTV7 478 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 ZFP57Q9NU63 452 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 TMEM89A2RUT3 159 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 SH2D1BO14796 132 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 HOXB5P09067 269 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 MUC1P15941 1255 aaPredicted RBP14.44□□□□□ -0.1
MRPL28-208ENST00000469744 DUSP1P28562 367 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 CFHR2P36980 270 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 HLA-DRB3P79483 266 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 IGSF11Q5DX21 431 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 C6orf183Q5T699 404 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 LDLRAD3Q86YD5 345 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 DCUN1D4Q92564 292 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 AQP10Q96PS8 301 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 TBX15Q96SF7 602 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 SLC25A32Q9H2D1 315 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 KAAG1Q9UBP8 84 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 GLS2Q9UI32 602 aa14.44□□□□□ -0.1
MRPL28-208ENST00000469744 PIGBOS1A0A0B4J2F0 54 aa14.43□□□□□ -0.1
MRPL28-208ENST00000469744 H0YIZ8 118 aa14.43□□□□□ -0.1
MRPL28-208ENST00000469744 TOX4O94842 621 aa14.43□□□□□ -0.1
MRPL28-208ENST00000469744 SCTP09683 121 aa14.43□□□□□ -0.1
MRPL28-208ENST00000469744 ZNF44P15621 663 aa14.43□□□□□ -0.1
MRPL28-208ENST00000469744 PRTN3P24158 256 aa14.43□□□□□ -0.1
MRPL28-208ENST00000469744 GGNBP1Q5YKI7 109 aa14.43□□□□□ -0.1
MRPL28-208ENST00000469744 STUMQ69YW2 141 aa14.43□□□□□ -0.1
MRPL28-208ENST00000469744 ZNF565Q8N9K5 539 aa14.43□□□□□ -0.1
MRPL28-208ENST00000469744 STOML3Q8TAV4 291 aa14.43□□□□□ -0.1
MRPL28-208ENST00000469744 TAF15Q92804 592 aaKnown RBP eCLIP14.43□□□□□ -0.1
MRPL28-208ENST00000469744 PRR13Q9NZ81 148 aa14.43□□□□□ -0.1
MRPL28-208ENST00000469744 GPR31O00270 319 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 SLC33A1O00400 549 aaPredicted RBP14.42□□□□□ -0.1
MRPL28-208ENST00000469744 MPPED1O15442 326 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 NXPH2O95156 264 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 NMBP08949 121 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 OR5AC1P0C628 307 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 MMP9P14780 707 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 LMO1P25800 156 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 ARF6P62330 175 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 IAH1Q2TAA2 248 aaPredicted RBP14.42□□□□□ -0.1
MRPL28-208ENST00000469744 DEFB112Q30KQ8 113 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 PAN3Q58A45 887 aaKnown RBP14.42□□□□□ -0.1
MRPL28-208ENST00000469744 GPR157Q5UAW9 335 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 ZNF497Q6ZNH5 498 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 C9orf139Q6ZV77 190 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 CITED4Q96RK1 184 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 SEBOXQ9HB31 216 aaPredicted RBP14.42□□□□□ -0.1
MRPL28-208ENST00000469744 RPUSD1Q9UJJ7 312 aaKnown RBP14.42□□□□□ -0.1
MRPL28-208ENST00000469744 TMED3Q9Y3Q3 217 aa14.42□□□□□ -0.1
MRPL28-208ENST00000469744 DUXBA0A1W2PPF3 345 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 MPTX1A8MV57 137 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 OR2H2O95918 312 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 GNRHRP30968 328 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 RAB32Q13637 225 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 ATXN7L3Q14CW9 347 aaPredicted RBP14.41□□□□□ -0.1
MRPL28-208ENST00000469744 HERPUD1Q15011 391 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 PHLDA2Q53GA4 152 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 ALKAL2Q6UX46 152 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 COMMD7Q86VX2 200 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 PDZD9Q8IXQ8 264 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 OR10Z1Q8NGY1 313 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 GLYATL2Q8WU03 294 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 SIRPDQ9H106 197 aa14.41□□□□□ -0.1
MRPL28-208ENST00000469744 IGKV1-6A0A0C4DH72 117 aa14.4□□□□□ -0.1
MRPL28-208ENST00000469744 RLN2P04090 185 aa14.4□□□□□ -0.1
MRPL28-208ENST00000469744 LIPFP07098 398 aa14.4□□□□□ -0.1
MRPL28-208ENST00000469744 COMPP49747 757 aaPredicted RBP14.4□□□□□ -0.1
MRPL28-208ENST00000469744 PRB3Q04118 309 aaPredicted RBP14.4□□□□□ -0.1
MRPL28-208ENST00000469744 SMCO1Q147U7 214 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms