RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 ZNF355PQ9NSJ1 428 aa9.39□□□□□ -0.91
HDAC3-204ENST00000469207 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
HDAC3-204ENST00000469207 ABRACLQ9P1F3 81 aa9.39□□□□□ -0.91
HDAC3-204ENST00000469207 OR5H14A6NHG9 310 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 LDLRAD4O15165 306 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 SOCS1O15524 211 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 SCTP09683 121 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 RPS16P62249 146 aaKnown RBP9.38□□□□□ -0.91
HDAC3-204ENST00000469207 SSBP2P81877 361 aaPredicted RBP9.38□□□□□ -0.91
HDAC3-204ENST00000469207 PJVKQ0ZLH3 352 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 ZNF562Q6V9R5 426 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 AHSA2Q719I0 299 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 NANOGP1Q8N7R0 232 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 ZNF383Q8NA42 475 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 OR5AN1Q8NGI8 311 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 GRPEL2Q8TAA5 225 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 AK3Q9UIJ7 227 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 WASHC3Q9Y3C0 194 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 LRRC42Q9Y546 428 aa9.38□□□□□ -0.91
HDAC3-204ENST00000469207 PLECQ15149 4684 aaKnown RBP9.38□□□□□ -0.91
HDAC3-204ENST00000469207 EFCAB10A6NFE3 127 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 APELAP0DMC3 54 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 ARSBP15848 533 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 MC5RP33032 325 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 WNT4P56705 351 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 TAS2R43P59537 309 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 QRFPP83859 136 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 MED21Q13503 144 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 FXYD3Q14802 87 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 C1orf100Q5SVJ3 147 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 TTC23Q5W5X9 447 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 FAM71F2Q6NXP2 309 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 IL34Q6ZMJ4 242 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 ANKRD13BQ86YJ7 626 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 C10orf67Q8IYJ2 551 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 TCTEX1D1Q8N7M0 179 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 NKAIN3Q8N8D7 197 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 BPIFB6Q8NFQ5 453 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 TMED9Q9BVK6 235 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 TMEM59Q9BXS4 323 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 PLEKHJ1Q9NW61 149 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 GHRLQ9UBU3 117 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 PSORS1C1Q9UIG5 152 aa9.37□□□□□ -0.91
HDAC3-204ENST00000469207 IGKV1-6A0A0C4DH72 117 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 IZUMO1RA6ND01 250 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 TMEM14DPA8MWL7 114 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 MYL12BO14950 172 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 HSPA12AO43301 675 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 SLC25A17O43808 307 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 RBMXL2O75526 392 aaKnown RBP9.36□□□□□ -0.91
HDAC3-204ENST00000469207 TRBV12-3P01733 135 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 TFAP2AP05549 437 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 CD1AP06126 327 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 CD3GP09693 182 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 CPEP16870 476 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 TMEM50BP56557 158 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 P2RY14Q15391 338 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 HAGHQ16775 308 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 RBM48Q5RL73 367 aaKnown RBP9.36□□□□□ -0.91
HDAC3-204ENST00000469207 GLT8D1Q68CQ7 371 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 PYHIN1Q6K0P9 492 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 DHRSXQ8N5I4 330 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 ELOVL1Q9BW60 279 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 TM2D1Q9BX74 207 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 LPAR5Q9H1C0 372 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 SLA2Q9H6Q3 261 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 RANGRFQ9HD47 186 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-204ENST00000469207 STUB1Q9UNE7 303 aa9.36□□□□□ -0.91
HDAC3-204ENST00000469207 A8MZ25 164 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 RBBP9O75884 186 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 UBBP0CG47 229 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 SRMP19623 302 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 ZBTB25P24278 435 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 CD40LGP29965 261 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 SYNJ2BPP57105 145 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 KLF5Q13887 457 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-204ENST00000469207 CEACAM19Q7Z692 300 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 SETD9Q8NE22 299 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 KCNG3Q8TAE7 436 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 ISOC1Q96CN7 298 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 GFI1Q99684 422 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 RNF5Q99942 180 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 RETNQ9HD89 108 aa9.35□□□□□ -0.91
HDAC3-204ENST00000469207 TNCP24821 2201 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 C13orf42A0A1B0GVH6 325 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 SRRM4A7MD48 611 aaKnown RBP9.34□□□□□ -0.91
HDAC3-204ENST00000469207 ITGB1BP1O14713 200 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 SLC22A1O15245 554 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 CNIH1O95406 144 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 IGLV2-23P01705 113 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 CSN3P07498 182 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 MAPK3P27361 379 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-204ENST00000469207 CLDN12P56749 244 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 HLA-DRB3P79483 266 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 PLA2G7Q13093 441 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 DYRK1AQ13627 763 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 SGPP2Q8IWX5 399 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 POC5Q8NA72 575 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 TMEM203Q969S6 136 aa9.34□□□□□ -0.91
HDAC3-204ENST00000469207 Q9N2K0 584 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms