RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 LOC102725191A0A1B0GVB3 256 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 A0A1W2PNV4 684 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 C10orf142B7Z368 130 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 DANCRP0C864 163 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 ZNF17P17021 662 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 CEBPDP49716 269 aaPredicted RBP10.55□□□□□ -0.72
USP11-206ENST00000469080 TMEM123Q8N131 208 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 TMEM217Q8N7C4 229 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 STXBP6Q8NFX7 210 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 ZCCHC14Q8WYQ9 949 aaKnown RBP10.55□□□□□ -0.72
USP11-206ENST00000469080 OR10C1Q96KK4 312 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 PECRQ9BY49 303 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 AK3Q9UIJ7 227 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 UBE2J1Q9Y385 318 aaPredicted RBP10.55□□□□□ -0.72
USP11-206ENST00000469080 ACACBO00763 2458 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 TRAPPC2LH3BP13 241 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 OPN1MWP04001 364 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 OPN1MW2P0DN77 364 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 OPN1MW3P0DN78 364 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 IGFBP3P17936 291 aaPredicted RBP10.55□□□□□ -0.72
USP11-206ENST00000469080 FAM3AP98173 230 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 IZUMO4Q1ZYL8 232 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 SAMD13Q5VXD3 122 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 GGNQ86UU5 652 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 LFNGQ8NES3 379 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 RFESDQ8TAC1 157 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 C20orf144Q9BQM9 153 aa10.55□□□□□ -0.72
USP11-206ENST00000469080 PATZ1Q9HBE1 687 aaKnown RBP10.55□□□□□ -0.72
USP11-206ENST00000469080 KALRNO60229 2985 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 SP1P08047 785 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 ACP1P24666 158 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 PIGPP57054 158 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 EDDM3AQ14507 147 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 CNN3Q15417 329 aaKnown RBP10.54□□□□□ -0.72
USP11-206ENST00000469080 OR4A47Q6IF82 309 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 DEFB108BQ8NET1 73 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 MOB3AQ96BX8 217 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 RBMXL1Q96E39 390 aaKnown RBP10.54□□□□□ -0.72
USP11-206ENST00000469080 HS3ST6Q96QI5 342 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 NUDT16L1Q9BRJ7 211 aaKnown RBP10.54□□□□□ -0.72
USP11-206ENST00000469080 RBKSQ9H477 322 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 SYNGR1O43759 233 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 SLC25A17O43808 307 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 LILRA1O75019 489 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 CHRM2P08172 466 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 PRDX4Q13162 271 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 RNFT1Q5M7Z0 435 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 SGPP2Q8IWX5 399 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 MKXQ8IYA7 352 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 ZFP62Q8NB50 900 aaPredicted RBP10.54□□□□□ -0.72
USP11-206ENST00000469080 CRIM1Q9NZV1 1036 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 OSGIN2Q9Y236 505 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 IGHV2-70DA0A0C4DH43 119 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 ANKRD30BLA7E2S9 258 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 IGHMP01871 453 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 SRP19P09132 144 aaKnown RBP10.54□□□□□ -0.72
USP11-206ENST00000469080 BCL3P20749 454 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 UCP2P55851 309 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 PRSS8Q16651 343 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 CLEC18BQ6UXF7 455 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 FAM89BQ8N5H3 189 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 LYPD6BQ8NI32 183 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 BTF3L4Q96K17 158 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 SRD5A3Q9H8P0 318 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 BET1LQ9NYM9 111 aa10.54□□□□□ -0.72
USP11-206ENST00000469080 YLPM1P49750 1951 aaKnown RBP10.54□□□□□ -0.72
USP11-206ENST00000469080 WDR1O75083 606 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 ZNF735P0CB33 412 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 PCBD1P61457 104 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 RPL23AP62750 156 aaKnown RBP10.53□□□□□ -0.72
USP11-206ENST00000469080 RSPO1Q2MKA7 263 aaPredicted RBP10.53□□□□□ -0.72
USP11-206ENST00000469080 FAM27BQ5VT28 67 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 ZNF826PQ6ZT77 177 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 OSR2Q8N2R0 312 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 KCNE4Q8WWG9 221 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 ERGIC1Q969X5 290 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 PNRC2Q9NPJ4 139 aaKnown RBP10.53□□□□□ -0.72
USP11-206ENST00000469080 MRPS34P82930 218 aaKnown RBP10.53□□□□□ -0.72
USP11-206ENST00000469080 SAXO1Q8IYX7 474 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 TMEM256Q8N2U0 113 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 EMG1Q92979 244 aaKnown RBP10.53□□□□□ -0.72
USP11-206ENST00000469080 SELENOKQ9Y6D0 94 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 COL4A2P08572 1712 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 ISG15P05161 165 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 CD55P08174 381 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 TNFSF4P23510 183 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 OR13G1Q8NGZ3 307 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 NABP1Q96AH0 204 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 ACY3Q96HD9 319 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 MOB1AQ9H8S9 216 aa10.53□□□□□ -0.72
USP11-206ENST00000469080 KLF13Q9Y2Y9 288 aaPredicted RBP10.53□□□□□ -0.72
USP11-206ENST00000469080 IGKV1-27A0A075B6S5 117 aa10.52□□□□□ -0.72
USP11-206ENST00000469080 A0A1B0GU03 582 aa10.52□□□□□ -0.72
USP11-206ENST00000469080 ZNF503-AS2A6NEH8 195 aa10.52□□□□□ -0.72
USP11-206ENST00000469080 VSTM5A8MXK1 200 aa10.52□□□□□ -0.72
USP11-206ENST00000469080 E5RGE8 158 aa10.52□□□□□ -0.72
USP11-206ENST00000469080 SAP30O75446 220 aa10.52□□□□□ -0.72
USP11-206ENST00000469080 IL2RAP01589 272 aa10.52□□□□□ -0.72
USP11-206ENST00000469080 CTSDP07339 412 aaPredicted RBP10.52□□□□□ -0.72
USP11-206ENST00000469080 ZNF728P0DKX0 622 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms