RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SIGLEC8Q9NYZ4 499 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 IL36GQ9NZH8 169 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 SLC25A10Q9UBX3 287 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 CD207Q9UJ71 328 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 ANXA10Q9UJ72 324 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 LSM7Q9UK45 103 aaKnown RBP4.14□□□□□ -1.75
SF3B1-207ENST00000468925 Q9Y3F1 56 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 INSL6Q9Y581 213 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 ARL2-SNX15V9GYD0 113 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 DENND4CQ5VZ89 1909 aa4.14□□□□□ -1.75
SF3B1-207ENST00000468925 ANAPC1Q9H1A4 1944 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 MKI67P46013 3256 aaKnown RBP4.13□□□□□ -1.75
SF3B1-207ENST00000468925 IGSF23A1L1A6 192 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 PRSS37A4D1T9 235 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 FAM24AA6NFZ4 105 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 CASTOR2A6NHX0 329 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 C9orf118A6NHY6 69 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 ANKRD30BLA7E2S9 258 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 PRR32B1ATL7 298 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 C9JCJ5 164 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 F8W1H4 67 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 K7EP34 96 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 SLC33A1O00400 549 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-207ENST00000468925 FCN1O00602 326 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 ERI3O43414 337 aaKnown RBP4.13□□□□□ -1.75
SF3B1-207ENST00000468925 LAMTOR5O43504 91 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 SRSF10O75494 262 aaKnown RBP4.13□□□□□ -1.75
SF3B1-207ENST00000468925 TSPAN13O95857 204 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 MPIG6BO95866 241 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 ASAH2BP0C7U1 165 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 AZU1P20160 251 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 OPRM1P35372 400 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 CA7P43166 264 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 PGFP49763 221 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 CRYBA4P53673 196 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 HERV-K104P61576 105 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 RPS15AP62244 130 aaKnown RBP4.13□□□□□ -1.75
SF3B1-207ENST00000468925 YPEL5P62699 121 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 MRPS34P82930 218 aaKnown RBP4.13□□□□□ -1.75
SF3B1-207ENST00000468925 MRPS6P82932 125 aaKnown RBP4.13□□□□□ -1.75
SF3B1-207ENST00000468925 PSG9Q00887 426 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF90Q03938 601 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 EXOSC7Q15024 291 aaKnown RBP4.13□□□□□ -1.75
SF3B1-207ENST00000468925 PDGFRLQ15198 375 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 TBR1Q16650 682 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 TDRG1Q3Y452 100 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 CCSMST1Q4G0I0 132 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF324BQ6AW86 544 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-207ENST00000468925 GLIPR1L1Q6UWM5 242 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM108Q6UXF1 575 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 WDR82Q6UXN9 313 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 ASCL4Q6XD76 172 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 FOXI2Q6ZQN5 318 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 Q6ZS49 121 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 Q6ZS92 163 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 ERASQ7Z444 233 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 Q8N976 141 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 NECAP1Q8NC96 275 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF740Q8NDX6 193 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 OR10V1Q8NGI7 309 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 OR52M1Q8NGK5 317 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 OR1B1Q8NGR6 318 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 OR2K2Q8NGT1 345 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 OR10AC1Q8NH08 325 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 VSTM2AQ8TAG5 236 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 NT5CQ8TCD5 201 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 RNF133Q8WVZ7 376 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 C8orf44Q96CB5 159 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 UHRF2Q96PU4 802 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 SMIM14Q96QK8 99 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 CHRDL1Q9BU40 450 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 LRRC61Q9BV99 259 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 ST6GALNAC5Q9BVH7 336 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 SFXN3Q9BWM7 321 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 VN1R1Q9GZP7 353 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 COMMD5Q9GZQ3 224 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 TMEM222Q9H0R3 208 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF665Q9H7R5 613 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 FSCN3Q9NQT6 498 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 RPRMQ9NS64 109 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 TAC3Q9UHF0 121 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 NAT8BQ9UHF3 227 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 ABT1Q9ULW3 272 aaKnown RBP4.13□□□□□ -1.75
SF3B1-207ENST00000468925 MMP17Q9ULZ9 603 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 B9D1Q9UPM9 204 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 WASHC3Q9Y3C0 194 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 OR1A2Q9Y585 309 aa4.13□□□□□ -1.75
SF3B1-207ENST00000468925 PPIAL4EA0A075B759 164 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 PPIAL4CA0A0B4J2A2 164 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 C3orf85A0A1B0GTC6 90 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 A0A1B0GV50 99 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 A0A1W2PR80 420 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 hADV38S2A0JD32 116 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 C7orf71A4D174 169 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 GAGE12HA6NDE8 117 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 ZNF840PA6NDX5 716 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 SLC22A20A6NK97 555 aa4.12□□□□□ -1.75
SF3B1-207ENST00000468925 FOXI3A8MTJ6 420 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-207ENST00000468925 B4DGG1 531 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms