RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 SRSF7Q16629 238 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRIM56-203ENST00000467847 LFNGQ8NES3 379 aa13.29□□□□□ -0.28
TRIM56-203ENST00000467847 BPIFB6Q8NFQ5 453 aa13.29□□□□□ -0.28
TRIM56-203ENST00000467847 PHYHIPQ92561 330 aa13.29□□□□□ -0.28
TRIM56-203ENST00000467847 RNF5Q99942 180 aa13.29□□□□□ -0.28
TRIM56-203ENST00000467847 AGMATQ9BSE5 352 aa13.29□□□□□ -0.28
TRIM56-203ENST00000467847 TMED9Q9BVK6 235 aa13.29□□□□□ -0.28
TRIM56-203ENST00000467847 PLCXD1Q9NUJ7 323 aa13.29□□□□□ -0.28
TRIM56-203ENST00000467847 PLEKHJ1Q9NW61 149 aa13.29□□□□□ -0.28
TRIM56-203ENST00000467847 ITGB1BP1O14713 200 aa13.28□□□□□ -0.28
TRIM56-203ENST00000467847 HSPA12AO43301 675 aa13.28□□□□□ -0.28
TRIM56-203ENST00000467847 CA2P00918 260 aa13.28□□□□□ -0.28
TRIM56-203ENST00000467847 ZBTB25P24278 435 aa13.28□□□□□ -0.28
TRIM56-203ENST00000467847 CEACAM6P40199 344 aa13.28□□□□□ -0.28
TRIM56-203ENST00000467847 PSG5Q15238 335 aa13.28□□□□□ -0.28
TRIM56-203ENST00000467847 ZNF562Q6V9R5 426 aa13.28□□□□□ -0.28
TRIM56-203ENST00000467847 MS4A15Q8N5U1 240 aa13.28□□□□□ -0.28
TRIM56-203ENST00000467847 DRAXINQ8NBI3 349 aaPredicted RBP13.28□□□□□ -0.28
TRIM56-203ENST00000467847 EDARADDQ8WWZ3 215 aa13.28□□□□□ -0.28
TRIM56-203ENST00000467847 RIMS4Q9H426 269 aaPredicted RBP13.28□□□□□ -0.28
TRIM56-203ENST00000467847 SLA2Q9H6Q3 261 aa13.28□□□□□ -0.28
TRIM56-203ENST00000467847 GAR1Q9NY12 217 aaKnown RBP13.28□□□□□ -0.28
TRIM56-203ENST00000467847 OR1A1Q9P1Q5 309 aa13.28□□□□□ -0.28
TRIM56-203ENST00000467847 A0A0A6YYD4 124 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 LCE6AA0A183 80 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 TMEM14DPA8MWL7 114 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 ARPC1BO15143 372 aaKnown RBP13.27□□□□□ -0.29
TRIM56-203ENST00000467847 SLC22A1O15245 554 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 BPNT1O95861 308 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 TFAP2AP05549 437 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 SNRPBP14678 240 aaKnown RBP13.27□□□□□ -0.29
TRIM56-203ENST00000467847 CPEP16870 476 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 SRMP19623 302 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 QRFPP83859 136 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 HAPLN4Q86UW8 402 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 FBLIM1Q8WUP2 373 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 RHOVQ96L33 236 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 HDHD3Q9BSH5 251 aaPredicted RBP13.27□□□□□ -0.29
TRIM56-203ENST00000467847 ELOVL1Q9BW60 279 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 MND1Q9BWT6 205 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 C11orf54Q9H0W9 315 aaPredicted RBP13.27□□□□□ -0.29
TRIM56-203ENST00000467847 AK3Q9UIJ7 227 aa13.27□□□□□ -0.29
TRIM56-203ENST00000467847 TRBV6-6A0A0A6YYG2 114 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 EBAG9O00559 213 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 TRGV3P03979 118 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 IGKV1-16P04430 117 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 RPS16P62249 146 aaKnown RBP13.26□□□□□ -0.29
TRIM56-203ENST00000467847 HLA-DRB3P79483 266 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 HSD17B12Q53GQ0 312 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 CEACAM19Q7Z692 300 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 GRPEL2Q8TAA5 225 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 TSNAXQ99598 290 aaKnown RBP13.26□□□□□ -0.29
TRIM56-203ENST00000467847 RSRP1Q9BUV0 290 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 ZNF355PQ9NSJ1 428 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 FKBP14Q9NWM8 211 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 MGAT4AQ9UM21 535 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 STUB1Q9UNE7 303 aa13.26□□□□□ -0.29
TRIM56-203ENST00000467847 SOCS1O15524 211 aa13.25□□□□□ -0.29
TRIM56-203ENST00000467847 SPDEFO95238 335 aa13.25□□□□□ -0.29
TRIM56-203ENST00000467847 IGHV4-30-4P0DP06 118 aa13.25□□□□□ -0.29
TRIM56-203ENST00000467847 ANKRD13BQ86YJ7 626 aa13.25□□□□□ -0.29
TRIM56-203ENST00000467847 OR6M1Q8NGM8 313 aa13.25□□□□□ -0.29
TRIM56-203ENST00000467847 CITED4Q96RK1 184 aa13.25□□□□□ -0.29
TRIM56-203ENST00000467847 URM1Q9BTM9 101 aaKnown RBP13.25□□□□□ -0.29
TRIM56-203ENST00000467847 LPAR5Q9H1C0 372 aa13.25□□□□□ -0.29
TRIM56-203ENST00000467847 C12orf4Q9NQ89 552 aa13.25□□□□□ -0.29
TRIM56-203ENST00000467847 ZNF221Q9UK13 617 aa13.25□□□□□ -0.29
TRIM56-203ENST00000467847 C13orf42A0A1B0GVH6 325 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 LDLRAD4O15165 306 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 SLC25A17O43808 307 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 PROP1O75360 226 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 IGLV1-51P01701 117 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 APOA2P02652 100 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 SCTP09683 121 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 LINC00205P59089 165 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 FXYD3Q14802 87 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 RCN1Q15293 331 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 P2RY14Q15391 338 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 PDPNQ86YL7 162 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 ZNF383Q8NA42 475 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 PTX4Q96A99 478 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 TM2D3Q9BRN9 247 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 RANGRFQ9HD47 186 aaPredicted RBP13.24□□□□□ -0.29
TRIM56-203ENST00000467847 Q9N2K0 584 aa13.24□□□□□ -0.29
TRIM56-203ENST00000467847 CNIH1O95406 144 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 CDK1P06493 297 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 UCHL1P09936 223 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 CD37P11049 281 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 ARSBP15848 533 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 ZP3P21754 424 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 SPHARQ15513 63 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 RNLSQ5VYX0 342 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 SGPP2Q8IWX5 399 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 Q8N1Y9 231 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 POC5Q8NA72 575 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 PLGRKTQ9HBL7 147 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 HSF4Q9ULV5 492 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 TNCP24821 2201 aa13.23□□□□□ -0.29
TRIM56-203ENST00000467847 A0A0G2JLM5 398 aa13.22□□□□□ -0.29
TRIM56-203ENST00000467847 ANKRD34BA5PLL1 514 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms