RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 C22orf46C9J442 243 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 TEX46H3BTG2 121 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 MGST3O14880 152 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 NDUFB3O43676 98 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 ABCA1O95477 2261 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 GLIPR1P48060 266 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 ZNF497Q6ZNH5 498 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 Q6ZPA2 131 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 GVQW1Q8N7I0 195 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 BPIFCQ8NFQ6 507 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 OR8B3Q8NGG8 313 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 OR4K15Q8NH41 348 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 OR52I2Q8NH67 350 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 OR1S1Q8NH92 325 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 RNASE8Q8TDE3 154 aaKnown RBP5.68□□□□□ -1.5
SCAF4-204ENST00000467731 C15orf40Q8WUR7 153 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 SMIM4Q8WVI0 70 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 NEIL1Q96FI4 390 aaPredicted RBP5.68□□□□□ -1.5
SCAF4-204ENST00000467731 NOL4LQ96MY1 436 aaPredicted RBP5.68□□□□□ -1.5
SCAF4-204ENST00000467731 OR8B2Q96RD0 313 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 KLK11Q9UBX7 282 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 CLN8Q9UBY8 286 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 ACANP16112 2415 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 F5H0A9 414 aaPredicted RBP5.68□□□□□ -1.5
SCAF4-204ENST00000467731 GABARAPH6UMI1 98 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 CTDSPLO15194 276 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 SPDEFO95238 335 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 NAPSAO96009 420 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 S100A2P29034 98 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 IL2RGP31785 369 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 GDNFP39905 211 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 LMO4P61968 165 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 PAX5Q02548 391 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 CD276Q5ZPR3 534 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 PRSS57Q6UWY2 283 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 TRAPPC6BQ86SZ2 158 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 GAPTQ8N292 157 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 MRPL30Q8TCC3 161 aaKnown RBP5.68□□□□□ -1.5
SCAF4-204ENST00000467731 GPX8Q8TED1 209 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 UPRTQ96BW1 309 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 RRNAD1Q96FB5 475 aaKnown RBP5.68□□□□□ -1.5
SCAF4-204ENST00000467731 C7orf50Q9BRJ6 194 aaKnown RBP5.68□□□□□ -1.5
SCAF4-204ENST00000467731 CSPG4Q6UVK1 2322 aa5.68□□□□□ -1.5
SCAF4-204ENST00000467731 MEIKINA0A087WXM9 373 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 TRAV39A0A0B4J263 110 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 COLCA2A8K830 154 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 GPR31O00270 319 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 PHF1O43189 567 aaPredicted RBP5.67□□□□□ -1.5
SCAF4-204ENST00000467731 LANCL1O43813 399 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 CA11O75493 328 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 PPBPP02775 128 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 FCGR3AP08637 254 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 SLC25A16P16260 332 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 RCC1P18754 421 aaPredicted RBP5.67□□□□□ -1.5
SCAF4-204ENST00000467731 PPT1P50897 306 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 GNB2P62879 340 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 MRPS10P82664 201 aaKnown RBP5.67□□□□□ -1.5
SCAF4-204ENST00000467731 PEA15Q15121 130 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 WDR25Q64LD2 544 aaPredicted RBP5.67□□□□□ -1.5
SCAF4-204ENST00000467731 UQCC3Q6UW78 93 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 CCDC107Q8WV48 283 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 H1FXQ92522 213 aaKnown RBP5.67□□□□□ -1.5
SCAF4-204ENST00000467731 Q96MF0 132 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 TMEM30CPA0ZSE6 113 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 A8MWP6 167 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 MT-ND4P03905 459 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 NQO2P16083 231 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 NPY4RP50391 375 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 SURF2Q15527 256 aaPredicted RBP5.67□□□□□ -1.5
SCAF4-204ENST00000467731 SLC35E4Q6ICL7 350 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 WFDC11Q8NEX6 87 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 FCAMRQ8WWV6 532 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 FOXC2Q99958 501 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 DCTN5Q9BTE1 182 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 ST6GALNAC5Q9BVH7 336 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 SSBP3Q9BWW4 388 aaPredicted RBP5.67□□□□□ -1.5
SCAF4-204ENST00000467731 CLEC5AQ9NY25 188 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 TRAPPC2LQ9UL33 140 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 A0A096LNT2 108 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 ODAMA1E959 279 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 GSTZ1O43708 216 aaPredicted RBP5.67□□□□□ -1.5
SCAF4-204ENST00000467731 RGS11O94810 467 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 IFNA17P01571 189 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 RPL31P62899 125 aaKnown RBP5.67□□□□□ -1.5
SCAF4-204ENST00000467731 GAMTQ14353 236 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 CLINT1Q14677 625 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 C5orf24Q7Z6I8 188 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 UBAC2Q8NBM4 344 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 OR11H7Q8NGC8 314 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 OR13A1Q8NGR1 328 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 RAB39BQ96DA2 213 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 THAP7Q9BT49 309 aaPredicted RBP5.67□□□□□ -1.5
SCAF4-204ENST00000467731 CSTL1Q9H114 145 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 MTFP1Q9UDX5 166 aa5.67□□□□□ -1.5
SCAF4-204ENST00000467731 IGKV1D-8A0A087WSZ0 117 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 RNF223E7ERA6 249 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 LYRM1O43325 122 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 SOX15O60248 233 aa5.66□□□□□ -1.5
SCAF4-204ENST00000467731 SNRPCP09234 159 aaKnown RBP5.66□□□□□ -1.5
SCAF4-204ENST00000467731 USF1P22415 310 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms