RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 PLAC9Q5JTB6 97 aa11.46□□□□□ -0.57
ATPAF2-204ENST00000467560 DRAXINQ8NBI3 349 aaPredicted RBP11.46□□□□□ -0.57
ATPAF2-204ENST00000467560 OR1N2Q8NGR9 330 aa11.46□□□□□ -0.57
ATPAF2-204ENST00000467560 ARHGAP5-AS1Q96IT6 56 aa11.46□□□□□ -0.57
ATPAF2-204ENST00000467560 UBE2E2Q96LR5 201 aa11.46□□□□□ -0.57
ATPAF2-204ENST00000467560 STEAP1Q9UHE8 339 aa11.46□□□□□ -0.57
ATPAF2-204ENST00000467560 RNF150Q9ULK6 438 aa11.46□□□□□ -0.57
ATPAF2-204ENST00000467560 RAB29O14966 203 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 ARSBP15848 533 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 CEACAM6P40199 344 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 ECI1P42126 302 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 CX3CL1P78423 397 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 HLA-DRB3P79483 266 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 RUNX1Q01196 453 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 ECSCRQ19T08 205 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 ZNF260Q3ZCT1 412 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 C9orf66Q5T8R8 295 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 FAM71F2Q6NXP2 309 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 TSPAN14Q8NG11 270 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 OR5AN1Q8NGI8 311 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 PLGRKTQ9HBL7 147 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 Q9N2K0 584 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 PIPOXQ9P0Z9 390 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 VSIG4Q9Y279 399 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 A3GALT2U3KPV4 340 aa11.45□□□□□ -0.58
ATPAF2-204ENST00000467560 SHISA3A0PJX4 238 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 RRHO14718 337 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 LDLRAD4O15165 306 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 RAMP3O60896 148 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 CALRP27797 417 aaKnown RBP11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 VEGFCP49767 419 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 RAB11BQ15907 218 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 TMEM65Q6PI78 240 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 MOB1BQ7L9L4 216 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 CHCHD6Q9BRQ6 235 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 FAM103A1Q9BTL3 118 aaKnown RBP11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 PECRQ9BY49 303 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 NDUFB11Q9NX14 153 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 KCNK7Q9Y2U2 307 aa11.44□□□□□ -0.58
ATPAF2-204ENST00000467560 IGKV1-16P04430 117 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 CD3GP09693 182 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 RANBP1P43487 201 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 CRIP2P52943 208 aaPredicted RBP11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 PSG5Q15238 335 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 C2orf76Q3KRA6 126 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 MOGAT2Q3SYC2 334 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 HES5Q5TA89 166 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 CD200R1LQ6Q8B3 271 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 ZNF383Q8NA42 475 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 DCUN1D4Q92564 292 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 PTX4Q96A99 478 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 FAM3DQ96BQ1 224 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 CLCC1Q96S66 551 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 URM1Q9BTM9 101 aaKnown RBP11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 RIMS4Q9H426 269 aaPredicted RBP11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 C12orf4Q9NQ89 552 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 TPSG1Q9NRR2 321 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 KIAA1456Q9P272 454 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 HSF4Q9ULV5 492 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 NUBP2Q9Y5Y2 271 aa11.43□□□□□ -0.58
ATPAF2-204ENST00000467560 TMEM272A0A1B0GTI8 110 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 A0A1W2PN81 502 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 OR5H14A6NHG9 310 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 H7C2Y5 167 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 ITGB1BP1O14713 200 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 ARL6IP5O75915 188 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 ZBTB25P24278 435 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 CHRNA7P36544 502 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 SLURP1P55000 103 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 SSBP2P81877 361 aaPredicted RBP11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 ZNF616Q08AN1 781 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 SSX1Q16384 188 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 ZNF660Q6AZW8 331 aaPredicted RBP11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 DLX4Q92988 240 aaPredicted RBP11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 C5orf30Q96GV9 206 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 ASCL2Q99929 193 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 WASHC3Q9Y3C0 194 aa11.42□□□□□ -0.58
ATPAF2-204ENST00000467560 HSPA12AO43301 675 aa11.41□□□□□ -0.58
ATPAF2-204ENST00000467560 GSTP1P09211 210 aaKnown RBP11.41□□□□□ -0.58
ATPAF2-204ENST00000467560 OR8U8P0C7N1 319 aa11.41□□□□□ -0.58
ATPAF2-204ENST00000467560 OR10A3P58181 314 aa11.41□□□□□ -0.58
ATPAF2-204ENST00000467560 CMSS1Q9BQ75 279 aaKnown RBP11.41□□□□□ -0.58
ATPAF2-204ENST00000467560 TOLLIPQ9H0E2 274 aa11.41□□□□□ -0.58
ATPAF2-204ENST00000467560 RDH8Q9NYR8 311 aa11.41□□□□□ -0.58
ATPAF2-204ENST00000467560 METTL1Q9UBP6 276 aaKnown RBP11.41□□□□□ -0.58
ATPAF2-204ENST00000467560 FOXA2Q9Y261 457 aaPredicted RBP11.41□□□□□ -0.58
ATPAF2-204ENST00000467560 SORL1Q92673 2214 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 DNAH7Q8WXX0 4024 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 IGHV4OR15-8A0A075B7B6 117 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 A0A087WW49 117 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 A0A0B4J203 849 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 TRDV1A0A1B0GX56 115 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 TRDCB7Z8K6 153 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 CA2P00918 260 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 IGHV3-11P01762 117 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 PSMB9P28065 219 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 FGF9P31371 208 aaPredicted RBP11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 MC5RP33032 325 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 PLGLAQ15195 96 aa11.4□□□□□ -0.58
ATPAF2-204ENST00000467560 IGSF11Q5DX21 431 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms