RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 ZG16O60844 167 aa13.72□□□□□ -0.21
SLX4-202ENST00000466154 MMP9P14780 707 aa13.72□□□□□ -0.21
SLX4-202ENST00000466154 FAM201AQ5SY85 155 aa13.72□□□□□ -0.21
SLX4-202ENST00000466154 CXXC4Q9H2H0 198 aa13.72□□□□□ -0.21
SLX4-202ENST00000466154 TRAV17A0A0B4J275 112 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 HBE1P02100 147 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 ACP7Q6ZNF0 438 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 ZNF645Q8N7E2 425 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 OR5T1Q8NG75 326 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 LEAP2Q969E1 77 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 SARAFQ96BY9 339 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 C5orf30Q96GV9 206 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 PARD6AQ9NPB6 346 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 MBNL3Q9NUK0 354 aaKnown RBP13.71□□□□□ -0.21
SLX4-202ENST00000466154 MEOX2P50222 304 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 H2BFWTQ7Z2G1 175 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 C11orf53Q8IXP5 236 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 ADGRG4Q8IZF6 3080 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 VKORC1L1Q8N0U8 176 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 RPRMLQ8N4K4 120 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 LSM10Q969L4 123 aaKnown RBP13.71□□□□□ -0.21
SLX4-202ENST00000466154 TMPRSS5Q9H3S3 457 aa13.71□□□□□ -0.21
SLX4-202ENST00000466154 UNKLQ9H9P5 680 aaKnown RBP13.71□□□□□ -0.21
SLX4-202ENST00000466154 ODAMA1E959 279 aa13.71□□□□□ -0.22
SLX4-202ENST00000466154 SMCO3A2RU48 225 aa13.71□□□□□ -0.22
SLX4-202ENST00000466154 OOEPA6NGQ2 149 aa13.71□□□□□ -0.22
SLX4-202ENST00000466154 SPRY3O43610 288 aa13.71□□□□□ -0.22
SLX4-202ENST00000466154 S100A9P06702 114 aaKnown RBP13.71□□□□□ -0.22
SLX4-202ENST00000466154 TNFRSF9Q07011 255 aa13.71□□□□□ -0.22
SLX4-202ENST00000466154 RCC1LQ96I51 464 aaKnown RBP13.71□□□□□ -0.22
SLX4-202ENST00000466154 SLC39A9Q9NUM3 307 aa13.71□□□□□ -0.22
SLX4-202ENST00000466154 PROCRQ9UNN8 238 aa13.71□□□□□ -0.22
SLX4-202ENST00000466154 RNF212BA8MTL3 300 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 CATR1Q13166 79 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 CLEC12BQ2HXU8 276 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 PDZD11Q5EBL8 140 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 DEFB108BQ8NET1 73 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 PLCE1Q9P212 2302 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 IFNA17P01571 189 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 MDKP21741 143 aaPredicted RBP13.7□□□□□ -0.22
SLX4-202ENST00000466154 CD200P41217 278 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 ZNF726P1Q15940 193 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 ZNRF1Q8ND25 227 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 LHX4Q969G2 390 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 COA4Q9NYJ1 87 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 WIPI2Q9Y4P8 454 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 ACACAQ13085 2346 aa13.7□□□□□ -0.22
SLX4-202ENST00000466154 TGIF2-C20orf24A0A0A6YYL0 155 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 MAP1LC3B2A6NCE7 125 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 ACAA1P09110 424 aaPredicted RBP13.69□□□□□ -0.22
SLX4-202ENST00000466154 SMIM21Q3B7S5 101 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 TVP23CQ96ET8 276 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 MAP1LC3BQ9GZQ8 125 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 BTBD17A6NE02 478 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 TMEM210A6NLX4 147 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 LINC00473A8K010 186 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 CYB5BO43169 146 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 FCGR3BO75015 233 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 C4orf17Q53FE4 359 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 TAAR6Q96RI8 345 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 IGHV2OR16-5A0A0B4J2B6 119 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 IGHV1-18A0A0C4DH31 117 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 KIAA0141Q14154 515 aaPredicted RBP13.69□□□□□ -0.22
SLX4-202ENST00000466154 MSMO1Q15800 293 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 RPUSD4Q96CM3 377 aaKnown RBP13.69□□□□□ -0.22
SLX4-202ENST00000466154 NIT2Q9NQR4 276 aa13.69□□□□□ -0.22
SLX4-202ENST00000466154 AKAP13Q12802 2813 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 IGKV3-15P01624 115 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 EGR1P18146 543 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 FGF7P21781 194 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 LMO1P25800 156 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 NDUFA6P56556 154 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 SPRNQ5BIV9 151 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 NECAP1Q8NC96 275 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 DTD1Q8TEA8 209 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 TAF15Q92804 592 aaKnown RBP eCLIP13.68□□□□□ -0.22
SLX4-202ENST00000466154 WDR61Q9GZS3 305 aaKnown RBP13.68□□□□□ -0.22
SLX4-202ENST00000466154 SH3BGRL2Q9UJC5 107 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 YIF1AO95070 293 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 SELLP14151 372 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 ACSF3Q4G176 576 aaPredicted RBP13.68□□□□□ -0.22
SLX4-202ENST00000466154 ZNF506Q5JVG8 444 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 CD177Q8N6Q3 437 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 PRR33A8MZF0 331 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 NPIPB11E5RHQ5 1161 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 SPINT2O43291 252 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 HSPB1P04792 205 aaKnown RBP13.68□□□□□ -0.22
SLX4-202ENST00000466154 CXCL1P09341 107 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 TUBG1P23258 451 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 PRDX2P32119 198 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 TFF3Q07654 80 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 BHLHA15Q7RTS1 189 aaPredicted RBP13.68□□□□□ -0.22
SLX4-202ENST00000466154 MOGAT3Q86VF5 341 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 SNIP1Q8TAD8 396 aaKnown RBP13.68□□□□□ -0.22
SLX4-202ENST00000466154 Q8WTZ3 238 aa13.68□□□□□ -0.22
SLX4-202ENST00000466154 PKDREJQ9NTG1 2253 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 IGHG3P01860 377 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 GPR12P47775 334 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 ERVFRD-1P60508 538 aa13.67□□□□□ -0.22
SLX4-202ENST00000466154 LRRC75BQ2VPJ9 315 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms