RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 HSD17B6O14756 317 aa9□□□□□ -0.97
VCP-204ENST00000466100 SLC22A5O76082 557 aa9□□□□□ -0.97
VCP-204ENST00000466100 NDUFB6O95139 128 aa9□□□□□ -0.97
VCP-204ENST00000466100 EPHA1P21709 976 aa9□□□□□ -0.97
VCP-204ENST00000466100 ECI1P42126 302 aa9□□□□□ -0.97
VCP-204ENST00000466100 GPR12P47775 334 aa9□□□□□ -0.97
VCP-204ENST00000466100 BAMBIQ13145 260 aa9□□□□□ -0.97
VCP-204ENST00000466100 SURF2Q15527 256 aaPredicted RBP9□□□□□ -0.97
VCP-204ENST00000466100 BCL6BQ8N143 479 aaPredicted RBP9□□□□□ -0.97
VCP-204ENST00000466100 BVESQ8NE79 360 aa9□□□□□ -0.97
VCP-204ENST00000466100 RTN4IP1Q8WWV3 396 aaPredicted RBP9□□□□□ -0.97
VCP-204ENST00000466100 CREB3L1Q96BA8 519 aa9□□□□□ -0.97
VCP-204ENST00000466100 MALSU1Q96EH3 234 aa9□□□□□ -0.97
VCP-204ENST00000466100 ZNF221Q9UK13 617 aa9□□□□□ -0.97
VCP-204ENST00000466100 GPR132Q9UNW8 380 aa9□□□□□ -0.97
VCP-204ENST00000466100 VSIG4Q9Y279 399 aa9□□□□□ -0.97
VCP-204ENST00000466100 OOSP1A8MZH6 123 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 HNF1AP20823 631 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 PAX6P26367 422 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 IL3RAP26951 378 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 CEACAM3P40198 252 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 LGALS4P56470 323 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 RND3P61587 244 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 HABP2Q14520 560 aaPredicted RBP8.99□□□□□ -0.97
VCP-204ENST00000466100 RBMS2Q15434 407 aaKnown RBP8.99□□□□□ -0.97
VCP-204ENST00000466100 SLC38A6Q8IZM9 456 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 ZDHHC22Q8N966 263 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 CFHR4Q92496 578 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 ZNF486Q96H40 463 aaPredicted RBP8.99□□□□□ -0.97
VCP-204ENST00000466100 AKR1E2Q96JD6 320 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 NABP2Q9BQ15 211 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 SLC25A21Q9BQT8 299 aaPredicted RBP8.99□□□□□ -0.97
VCP-204ENST00000466100 RTBDNQ9BSG5 229 aaPredicted RBP8.99□□□□□ -0.97
VCP-204ENST00000466100 MRPL20Q9BYC9 149 aaKnown RBP8.99□□□□□ -0.97
VCP-204ENST00000466100 PRDM13Q9H4Q3 707 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 C5orf66Q9H5L9 145 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 OCEL1Q9H607 264 aa8.99□□□□□ -0.97
VCP-204ENST00000466100 RBM7Q9Y580 266 aaKnown RBP8.99□□□□□ -0.97
VCP-204ENST00000466100 IGHV1-3A0A0C4DH29 117 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 MDFIC2A0A1B0GVS7 189 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 LINC00473A8K010 186 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 INAFM1C9JVW0 142 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 M0R1X1 148 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 GPR31O00270 319 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 TXNL1O43396 289 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 CTSDP07339 412 aaPredicted RBP8.98□□□□□ -0.97
VCP-204ENST00000466100 CT45A6P0DMU7 189 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 CT45A5P0DMU8 189 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 CT45A7P0DMV0 189 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 PGAM2P15259 253 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 PI3P19957 117 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 DUTP33316 252 aaKnown RBP8.98□□□□□ -0.97
VCP-204ENST00000466100 REG1BP48304 166 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 LINC00205P59089 165 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 DEFA1P59665 94 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 DEFA3P59666 94 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 RPL30P62888 115 aaKnown RBP8.98□□□□□ -0.97
VCP-204ENST00000466100 SSX2Q16385 188 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 MZT2BQ6NZ67 158 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 LPCAT3Q6P1A2 487 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 Q71RC1 249 aaPredicted RBP8.98□□□□□ -0.97
VCP-204ENST00000466100 NRARPQ7Z6K4 114 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 TGIF2LXQ8IUE1 241 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 OR8H3Q8N146 312 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 ZNF383Q8NA42 475 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 POC5Q8NA72 575 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 ZBTB34Q8NCN2 500 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 ZFAND2BQ8WV99 257 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 DDB2Q92466 427 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 TMEM230Q96A57 120 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 RPEQ96AT9 228 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 ZNF48Q96MX3 618 aaPredicted RBP8.98□□□□□ -0.97
VCP-204ENST00000466100 GPHA2Q96T91 129 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 S1PR3Q99500 378 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 MS4A7Q9GZW8 240 aaPredicted RBP8.98□□□□□ -0.97
VCP-204ENST00000466100 MEGF9Q9H1U4 602 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 SLC2A9Q9NRM0 540 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 CDC42EP3Q9UKI2 254 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 HILPDAQ9Y5L2 63 aa8.98□□□□□ -0.97
VCP-204ENST00000466100 JMJD1CQ15652 2540 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 FAM240BA0A1B0GVZ2 78 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 FAM90A9PA6NNJ1 464 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 VGLL3A8MV65 326 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 TIMM23O14925 209 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 PTTG1O95997 202 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 GAPDHP04406 335 aaKnown RBP8.97□□□□□ -0.97
VCP-204ENST00000466100 TCRBP04435 133 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 BRWD1-AS2P59051 145 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 DEFB112Q30KQ8 113 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 PHLDA2Q53GA4 152 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 FBLN7Q53RD9 439 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 DRAXINQ8NBI3 349 aaPredicted RBP8.97□□□□□ -0.97
VCP-204ENST00000466100 DUSP18Q8NEJ0 188 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 OR5AN1Q8NGI8 311 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 ZFAND1Q8TCF1 268 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 C22orf15Q8WYQ4 148 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 HSD17B10Q99714 261 aaKnown RBP8.97□□□□□ -0.97
VCP-204ENST00000466100 DPAGT1Q9H3H5 408 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 FLVCR2Q9UPI3 526 aa8.97□□□□□ -0.97
VCP-204ENST00000466100 TNCP24821 2201 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms