RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 BATF2Q8N1L9 274 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 SVBPQ8N300 66 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 FAM216BQ8N7L0 139 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 LY6G5BQ8NDX9 201 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 GLYATL2Q8WU03 294 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 H1FXQ92522 213 aaKnown RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 DYRK2Q92630 601 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 GCDHQ92947 438 aaPredicted RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 MOB3AQ96BX8 217 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 PHYHIPLQ96FC7 376 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 ZNF2Q9BSG1 426 aaPredicted RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 HDHD3Q9BSH5 251 aaPredicted RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 TINAGL1Q9GZM7 467 aaPredicted RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 SLC25A32Q9H2D1 315 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 OR2S2Q9NQN1 319 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 CALYQ9NYX4 217 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 IDI2-AS1Q9NZ38 188 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 PIPOXQ9P0Z9 390 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 ZNF69Q9UC07 566 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 ZNF230Q9UIE0 474 aaPredicted RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 RPUSD1Q9UJJ7 312 aaKnown RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 GPR132Q9UNW8 380 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 RBM7Q9Y580 266 aaKnown RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 KPTNQ9Y664 436 aa4.97□□□□□ -1.61
CHMP3-206ENST00000466032 ASH1LQ9NR48 2969 aaKnown RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 USP9YO00507 2555 aaPredicted RBP4.97□□□□□ -1.61
CHMP3-206ENST00000466032 COL12A1Q99715 3063 aa4.96□□□□□ -1.61
CHMP3-206ENST00000466032 A0A087X0M5 115 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 A0A1B0GX30 115 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 TMEM218A2RU14 115 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 C17orf98A8MV24 154 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 C12orf77C9JDV5 145 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 C15orf65H3BRN8 121 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 GPR31O00270 319 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 SDCBPO00560 298 aaPredicted RBP4.96□□□□□ -1.62
CHMP3-206ENST00000466032 SCO1O75880 301 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 ATG12O94817 140 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 SCTP09683 121 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 ZNF735P0CB33 412 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 SULT1A3P0DMM9 295 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 SULT1A4P0DMN0 295 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 PGAM2P15259 253 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 RPA2P15927 270 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 USF1P22415 310 aaPredicted RBP4.96□□□□□ -1.62
CHMP3-206ENST00000466032 IL3RAP26951 378 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 BTCP35070 178 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 CEBPDP49716 269 aaPredicted RBP4.96□□□□□ -1.62
CHMP3-206ENST00000466032 TAS2R60P59551 318 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 BPIFB3P59826 476 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 ERVFRD-1P60508 538 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 RND3P61587 244 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 LOXL1Q08397 574 aaPredicted RBP4.96□□□□□ -1.62
CHMP3-206ENST00000466032 CLEC12BQ2HXU8 276 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 NCR3LG1Q68D85 454 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 TMEM200BQ69YZ2 307 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 ZNF660Q6AZW8 331 aaPredicted RBP4.96□□□□□ -1.62
CHMP3-206ENST00000466032 FAM71F2Q6NXP2 309 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 SLC25A42Q86VD7 318 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 SGPP2Q8IWX5 399 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 LINC00311Q8N616 119 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 ZNF525Q8N782 197 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 OR2AK2Q8NG84 335 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 OR10V1Q8NGI7 309 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 OR13A1Q8NGR1 328 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 OR13D1Q8NGV5 346 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 ZNF596Q8TC21 504 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 CD300LFQ8TDQ1 290 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 MRGPRDQ8TDS7 321 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 IL1F10Q8WWZ1 152 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 NARS2Q96I59 477 aaKnown RBP4.96□□□□□ -1.62
CHMP3-206ENST00000466032 ADTRPQ96IZ2 230 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 SLC6A7Q99884 636 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 FOXC2Q99958 501 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 C2orf88Q9BSF0 95 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 BPESC1Q9GZL8 116 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 C20orf85Q9H1P6 137 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 MED28Q9H204 178 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 METTL8Q9H825 291 aaKnown RBP4.96□□□□□ -1.62
CHMP3-206ENST00000466032 NUDT15Q9NV35 164 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 GFOD1Q9NXC2 390 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 GNG12Q9UBI6 72 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 CACFD1Q9UGQ2 172 aa4.96□□□□□ -1.62
CHMP3-206ENST00000466032 CARHSP1Q9Y2V2 147 aaKnown RBP4.96□□□□□ -1.62
CHMP3-206ENST00000466032 AMMECR1Q9Y4X0 333 aaPredicted RBP4.96□□□□□ -1.62
CHMP3-206ENST00000466032 A0A0B4J2A0 478 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 DUXBA0A1W2PPF3 345 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 C9orf170A2RU37 121 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 C5orf52A6NGY3 159 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 A6NJY4 79 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 B4DSR2 109 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 LYNX1G3V0Z9 82 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 J3QLI3 93 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 M0QYG6 137 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 RAB29O14966 203 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 TXNL1O43396 289 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 CREBL2O60519 120 aaPredicted RBP4.95□□□□□ -1.62
CHMP3-206ENST00000466032 ZNF205O95201 554 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 RLN1P04808 185 aa4.95□□□□□ -1.62
CHMP3-206ENST00000466032 GIPP09681 153 aaPredicted RBP4.95□□□□□ -1.62
CHMP3-206ENST00000466032 LYNX1P0DP58 116 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms