RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 OR2T6Q8NHC8 308 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 C5orf30Q96GV9 206 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 NXF2Q9GZY0 626 aaKnown RBP16.18■□□□□ 0.18
SKA3-205ENST00000465471 OR2D2Q9H210 308 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 SCPEP1Q9HB40 452 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 PLSCR3Q9NRY6 295 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 SERTAD4Q9NUC0 356 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 RSL24D1Q9UHA3 163 aaKnown RBP16.18■□□□□ 0.18
SKA3-205ENST00000465471 ZNF221Q9UK13 617 aa16.18■□□□□ 0.18
SKA3-205ENST00000465471 FAM25AB3EWG3 89 aa16.17■□□□□ 0.18
SKA3-205ENST00000465471 FAM25CB3EWG5 89 aa16.17■□□□□ 0.18
SKA3-205ENST00000465471 FAM25GB3EWG6 89 aa16.17■□□□□ 0.18
SKA3-205ENST00000465471 HNF4GQ14541 408 aa16.17■□□□□ 0.18
SKA3-205ENST00000465471 OR5AN1Q8NGI8 311 aa16.17■□□□□ 0.18
SKA3-205ENST00000465471 RBMXL1Q96E39 390 aaKnown RBP16.17■□□□□ 0.18
SKA3-205ENST00000465471 SDHAF2Q9NX18 166 aa16.17■□□□□ 0.18
SKA3-205ENST00000465471 EXTL2Q9UBQ6 330 aa16.17■□□□□ 0.18
SKA3-205ENST00000465471 OR2W1Q9Y3N9 320 aa16.17■□□□□ 0.18
SKA3-205ENST00000465471 OR5H14A6NHG9 310 aa16.16■□□□□ 0.18
SKA3-205ENST00000465471 SULT1C2O00338 296 aa16.16■□□□□ 0.18
SKA3-205ENST00000465471 NFYAP23511 347 aaPredicted RBP16.16■□□□□ 0.18
SKA3-205ENST00000465471 ARPC4P59998 168 aa16.16■□□□□ 0.18
SKA3-205ENST00000465471 KRTAP10-3P60369 221 aa16.16■□□□□ 0.18
SKA3-205ENST00000465471 OR5AP2Q8NGF4 316 aa16.16■□□□□ 0.18
SKA3-205ENST00000465471 OR8H1Q8NGG4 311 aa16.16■□□□□ 0.18
SKA3-205ENST00000465471 IFT46Q9NQC8 304 aa16.16■□□□□ 0.18
SKA3-205ENST00000465471 MRPS7Q9Y2R9 242 aaKnown RBP16.16■□□□□ 0.18
SKA3-205ENST00000465471 CCDC160A6NGH7 325 aa16.15■□□□□ 0.18
SKA3-205ENST00000465471 H0YJW9 148 aa16.15■□□□□ 0.18
SKA3-205ENST00000465471 ABCA11PQ4W5N1 156 aa16.15■□□□□ 0.18
SKA3-205ENST00000465471 FAM131AQ6UXB0 335 aa16.15■□□□□ 0.18
SKA3-205ENST00000465471 SNX29P2Q8IUI4 249 aa16.15■□□□□ 0.18
SKA3-205ENST00000465471 Q8N9W7 124 aa16.15■□□□□ 0.18
SKA3-205ENST00000465471 ZNF383Q8NA42 475 aa16.15■□□□□ 0.18
SKA3-205ENST00000465471 NECAP2Q9NVZ3 263 aa16.15■□□□□ 0.18
SKA3-205ENST00000465471 IGKV1D-13A0A0B4J2D9 117 aa16.14■□□□□ 0.17
SKA3-205ENST00000465471 RGS5O15539 181 aa16.14■□□□□ 0.17
SKA3-205ENST00000465471 FCER2P06734 321 aa16.14■□□□□ 0.17
SKA3-205ENST00000465471 IGKV1-13P0DP09 117 aa16.14■□□□□ 0.17
SKA3-205ENST00000465471 CDK10Q15131 360 aa16.14■□□□□ 0.17
SKA3-205ENST00000465471 SHISA2Q6UWI4 295 aa16.14■□□□□ 0.17
SKA3-205ENST00000465471 GLDNQ6ZMI3 551 aaPredicted RBP16.14■□□□□ 0.17
SKA3-205ENST00000465471 FAM71E2Q8N5Q1 922 aa16.14■□□□□ 0.17
SKA3-205ENST00000465471 WIPF2Q8TF74 440 aaPredicted RBP16.14■□□□□ 0.17
SKA3-205ENST00000465471 ABHD1Q96SE0 405 aa16.14■□□□□ 0.17
SKA3-205ENST00000465471 CITED1Q99966 193 aa16.14■□□□□ 0.17
SKA3-205ENST00000465471 WNT10AQ9GZT5 417 aa16.14■□□□□ 0.17
SKA3-205ENST00000465471 SH2D7A6NKC9 451 aaPredicted RBP16.13■□□□□ 0.17
SKA3-205ENST00000465471 M0R1X1 148 aa16.13■□□□□ 0.17
SKA3-205ENST00000465471 IGLV2-14P01704 120 aa16.13■□□□□ 0.17
SKA3-205ENST00000465471 OR5H8P0DN80 308 aa16.13■□□□□ 0.17
SKA3-205ENST00000465471 MC5RP33032 325 aa16.13■□□□□ 0.17
SKA3-205ENST00000465471 LUMP51884 338 aaPredicted RBP16.13■□□□□ 0.17
SKA3-205ENST00000465471 F2RL1P55085 397 aa16.13■□□□□ 0.17
SKA3-205ENST00000465471 OVCH2Q7RTZ1 564 aa16.13■□□□□ 0.17
SKA3-205ENST00000465471 LYSMD2Q8IV50 215 aa16.13■□□□□ 0.17
SKA3-205ENST00000465471 ZNF645Q8N7E2 425 aa16.13■□□□□ 0.17
SKA3-205ENST00000465471 DRAXINQ8NBI3 349 aaPredicted RBP16.13■□□□□ 0.17
SKA3-205ENST00000465471 RITA1Q96K30 269 aa16.13■□□□□ 0.17
SKA3-205ENST00000465471 LIN7CQ9NUP9 197 aaKnown RBP16.13■□□□□ 0.17
SKA3-205ENST00000465471 FCGR2CP31995 323 aa16.12■□□□□ 0.17
SKA3-205ENST00000465471 LINC00205P59089 165 aa16.12■□□□□ 0.17
SKA3-205ENST00000465471 TAS2R46P59540 309 aa16.12■□□□□ 0.17
SKA3-205ENST00000465471 ACTBP60709 375 aa16.12■□□□□ 0.17
SKA3-205ENST00000465471 TMEM95Q3KNT9 176 aa16.12■□□□□ 0.17
SKA3-205ENST00000465471 ZNF660Q6AZW8 331 aaPredicted RBP16.12■□□□□ 0.17
SKA3-205ENST00000465471 KLHDC1Q8N7A1 406 aa16.12■□□□□ 0.17
SKA3-205ENST00000465471 MCFD2Q8NI22 146 aa16.12■□□□□ 0.17
SKA3-205ENST00000465471 C15orf40Q8WUR7 153 aa16.12■□□□□ 0.17
SKA3-205ENST00000465471 GIMAP1Q8WWP7 306 aa16.12■□□□□ 0.17
SKA3-205ENST00000465471 C6orf62Q9GZU0 229 aaPredicted RBP16.12■□□□□ 0.17
SKA3-205ENST00000465471 WASHC3Q9Y3C0 194 aa16.12■□□□□ 0.17
SKA3-205ENST00000465471 RBM7Q9Y580 266 aaKnown RBP16.12■□□□□ 0.17
SKA3-205ENST00000465471 RBBP9O75884 186 aa16.11■□□□□ 0.17
SKA3-205ENST00000465471 SLC22A5O76082 557 aa16.11■□□□□ 0.17
SKA3-205ENST00000465471 NDUFA3O95167 84 aa16.11■□□□□ 0.17
SKA3-205ENST00000465471 AADACP22760 399 aa16.11■□□□□ 0.17
SKA3-205ENST00000465471 RCVRNP35243 200 aa16.11■□□□□ 0.17
SKA3-205ENST00000465471 VDAC2P45880 294 aaPredicted RBP16.11■□□□□ 0.17
SKA3-205ENST00000465471 SRSF4Q08170 494 aaKnown RBP16.11■□□□□ 0.17
SKA3-205ENST00000465471 DYRK1AQ13627 763 aa16.11■□□□□ 0.17
SKA3-205ENST00000465471 NPBQ8NG41 125 aa16.11■□□□□ 0.17
SKA3-205ENST00000465471 DDB2Q92466 427 aa16.11■□□□□ 0.17
SKA3-205ENST00000465471 DCUN1D5Q9BTE7 237 aa16.11■□□□□ 0.17
SKA3-205ENST00000465471 A3GALT2U3KPV4 340 aa16.11■□□□□ 0.17
SKA3-205ENST00000465471 NCBP2LA6PVI3 153 aaKnown RBP16.1■□□□□ 0.17
SKA3-205ENST00000465471 HAX1O00165 279 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 PPYP01298 95 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 IGHG2P01859 326 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 CNTFRP26992 372 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 DUTP33316 252 aaKnown RBP16.1■□□□□ 0.17
SKA3-205ENST00000465471 EIF4EBP1Q13541 118 aaPredicted RBP16.1■□□□□ 0.17
SKA3-205ENST00000465471 MMDQ15546 238 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 MSMO1Q15800 293 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 DHRS11Q6UWP2 260 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 PDPNQ86YL7 162 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 OR52I2Q8NH67 350 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 RNF5Q99942 180 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 EHFQ9NZC4 300 aa16.1■□□□□ 0.17
SKA3-205ENST00000465471 NDUFA13Q9P0J0 144 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms