RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ITGB1BP1O14713 200 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 RGS5O15539 181 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 TXNL1O43396 289 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 MOSP00540 346 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 PRSS3P35030 304 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 SOX6P35712 828 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 ARPC4P59998 168 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 CNIH2Q6PI25 160 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 C11orf88Q6PI97 169 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 FAM131AQ6UXB0 335 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 C16orf82Q7Z2V1 217 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 LAX1Q8IWV1 398 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 Q8N2B8 174 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 Q8N6K4 173 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 C5orf56Q8N8D9 126 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 CMTM3Q96MX0 182 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 S1PR3Q99500 378 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 IFT46Q9NQC8 304 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 PLSCR3Q9NRY6 295 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 SDHAF2Q9NX18 166 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 DNHD1Q96M86 4753 aa9.27□□□□□ -0.93
CUX1-207ENST00000465461 IGKV1D-13A0A0B4J2D9 117 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 LINC01548A6NM66 108 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 H0YJW9 148 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 PEX14O75381 377 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 PMP2P02689 132 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 IGKV1-13P0DP09 117 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 SHISA2Q6UWI4 295 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 KLHDC1Q8N7A1 406 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 Q8N9W7 124 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 ZNF383Q8NA42 475 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 AKR1E2Q96JD6 320 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 BCL7BQ9BQE9 202 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 RBM38Q9H0Z9 239 aaKnown RBP9.26□□□□□ -0.93
CUX1-207ENST00000465461 LINC00527Q9UJ94 153 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 STAB1Q9NY15 2570 aa9.26□□□□□ -0.93
CUX1-207ENST00000465461 H7C2Y5 167 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 CTXN2P0C2S0 81 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 AADACP22760 399 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 HLA-DMAP28067 261 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 FCGR2CP31995 323 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 VDAC2P45880 294 aaPredicted RBP9.25□□□□□ -0.93
CUX1-207ENST00000465461 ACTBP60709 375 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 FAM71F2Q6NXP2 309 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 C10orf99Q6UWK7 81 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 LYSMD2Q8IV50 215 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 ABHD1Q96SE0 405 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 GPHA2Q96T91 129 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 DCUN1D5Q9BTE7 237 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 SLIRPQ9GZT3 109 aaKnown RBP9.25□□□□□ -0.93
CUX1-207ENST00000465461 C6orf62Q9GZU0 229 aaPredicted RBP9.25□□□□□ -0.93
CUX1-207ENST00000465461 CCDC59Q9P031 241 aaKnown RBP9.25□□□□□ -0.93
CUX1-207ENST00000465461 OR2W1Q9Y3N9 320 aa9.25□□□□□ -0.93
CUX1-207ENST00000465461 DIRAS3O95661 229 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 IGLV2-14P01704 120 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 OR5H8P0DN80 308 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 CBX5P45973 191 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 RFX2P48378 723 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 LUMP51884 338 aaPredicted RBP9.24□□□□□ -0.93
CUX1-207ENST00000465461 MMDQ15546 238 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 OR5AP2Q8NGF4 316 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 OR5AN1Q8NGI8 311 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 GPX8Q8TED1 209 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 NOL4LQ96MY1 436 aaPredicted RBP9.24□□□□□ -0.93
CUX1-207ENST00000465461 CITED1Q99966 193 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 HSPB9Q9BQS6 159 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 GHITMQ9H3K2 345 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 NECAP2Q9NVZ3 263 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 RSL24D1Q9UHA3 163 aaKnown RBP9.24□□□□□ -0.93
CUX1-207ENST00000465461 ANAPC10Q9UM13 185 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 TENM1Q9UKZ4 2725 aa9.24□□□□□ -0.93
CUX1-207ENST00000465461 LINC00473A8K010 186 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 M0QZK8 103 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 FGF16O43320 207 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 TUSC2O75896 110 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 IGKV1-16P04430 117 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 CD28P10747 220 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 FXYD4P59646 89 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 CDK10Q15131 360 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 FAM71E2Q8N5Q1 922 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 BVESQ8NE79 360 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 OR52I2Q8NH67 350 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 MCFD2Q8NI22 146 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 RASL11BQ9BPW5 248 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 KRTAP3-3Q9BYR6 98 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 KRTAP3-2Q9BYR7 98 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 WNT10AQ9GZT5 417 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 CCL28Q9NRJ3 127 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 EHFQ9NZC4 300 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 KLK11Q9UBX7 282 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 GAB2Q9UQC2 676 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 WASHC3Q9Y3C0 194 aa9.23□□□□□ -0.93
CUX1-207ENST00000465461 OR5H14A6NHG9 310 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 NBR2O15453 112 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 TNFSF12O43508 249 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 PPYP01298 95 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 NAT1P18440 290 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 MC5RP33032 325 aa9.22□□□□□ -0.93
CUX1-207ENST00000465461 DUTP33316 252 aaKnown RBP9.22□□□□□ -0.93
CUX1-207ENST00000465461 HRH1P35367 487 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms