RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 LYSMD2Q8IV50 215 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 LYG1Q8N1E2 194 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 ZNF439Q8NDP4 499 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 CT45A3Q8NHU0 189 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 LEAP2Q969E1 77 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 CYYR1Q96J86 154 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 C11orf54Q9H0W9 315 aaPredicted RBP14.09□□□□□ -0.15
CPSF4-209ENST00000465132 DPAGT1Q9H3H5 408 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 AKIP1Q9NQ31 210 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 ABCB10Q9NRK6 738 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 GAB2Q9UQC2 676 aa14.09□□□□□ -0.15
CPSF4-209ENST00000465132 A0A1W2PRD5 423 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 A0A1W2PRF3 423 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 A0A1W2PRM7 423 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 ANKRD20A5PA0PJZ0 165 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 CD74P04233 296 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 ZNF137PP52743 207 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 MSMO1Q15800 293 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 ZNF79Q15937 498 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 OR8H3Q8N146 312 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 PIP4P2Q8N4L2 257 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 ZBTB34Q8NCN2 500 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 PRRT1Q99946 306 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 SCP2D1Q9UJQ7 156 aa14.08□□□□□ -0.16
CPSF4-209ENST00000465132 M0QZ24 198 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 HSD17B6O14756 317 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 LANCL1O43813 399 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 TUSC2O75896 110 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 IGHV3-7P01780 117 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 CD3DP04234 171 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 FCER2P06734 321 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 RFX2P48378 723 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 KRTAP10-3P60369 221 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 TAGLNQ01995 201 aaKnown RBP14.07□□□□□ -0.16
CPSF4-209ENST00000465132 SSX2Q16385 188 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 TPTE2P1Q5T6R2 138 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 ZNF57Q68EA5 555 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-209ENST00000465132 TGIF2LXQ8IUE1 241 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 OR5R1Q8NH85 324 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 SCGB3A2Q96PL1 93 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 C7orf50Q9BRJ6 194 aaKnown RBP14.07□□□□□ -0.16
CPSF4-209ENST00000465132 MEGF9Q9H1U4 602 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 TGP01266 2768 aa14.07□□□□□ -0.16
CPSF4-209ENST00000465132 A0A0U1RQK1 487 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 NAP1L6A6NFF2 107 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 TIMM23O14925 209 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 PPYP01298 95 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 IGHV4-59P01825 116 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 OR8U9P0C7N5 309 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 NFYAP23511 347 aaPredicted RBP14.06□□□□□ -0.16
CPSF4-209ENST00000465132 DYNLT3P51808 116 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 ZNF134P52741 427 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 DLX1P56177 255 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 PRB3Q04118 309 aaPredicted RBP14.06□□□□□ -0.16
CPSF4-209ENST00000465132 ZNF816Q0VGE8 651 aaPredicted RBP14.06□□□□□ -0.16
CPSF4-209ENST00000465132 OR8U1Q8NH10 309 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 ADTRPQ96IZ2 230 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 AKR1E2Q96JD6 320 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 AGMATQ9BSE5 352 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 ZNF2Q9BSG1 426 aaPredicted RBP14.06□□□□□ -0.16
CPSF4-209ENST00000465132 PITPNC1Q9UKF7 332 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 RNF114Q9Y508 228 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 HILPDAQ9Y5L2 63 aa14.06□□□□□ -0.16
CPSF4-209ENST00000465132 VWFP04275 2813 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 A0A1W2PPE3 182 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 VGLL3A8MV65 326 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 LY6LH3BQJ8 138 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 ST8SIA5O15466 376 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 GPR137BO60478 399 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 AMY2AP04746 511 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 IER3P46695 156 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 CBX3Q13185 183 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 LDLRAD3Q86YD5 345 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 CMTM1Q8IZ96 169 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 MFSD4AQ8N468 514 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 ZNF645Q8N7E2 425 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 LINC01006Q8NI28 216 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 OR2D2Q9H210 308 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 IFI27L2Q9H2X8 130 aa14.05□□□□□ -0.16
CPSF4-209ENST00000465132 FAM106CPP0CH98 169 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 AADACP22760 399 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 MC5RP33032 325 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 LRRC75BQ2VPJ9 315 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 ZNF833PQ6ZTB9 187 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 LHFPL4Q7Z7J7 247 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 TERB2Q8NHR7 220 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 RTN4IP1Q8WWV3 396 aaPredicted RBP14.04□□□□□ -0.16
CPSF4-209ENST00000465132 TRIM63Q969Q1 353 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 MOB3AQ96BX8 217 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 TSC22D3Q99576 134 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 MCUBQ9NWR8 336 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 ZNRD1Q9P1U0 126 aa14.04□□□□□ -0.16
CPSF4-209ENST00000465132 WNK1Q9H4A3 2382 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 SAA2-SAA4A0A096LPE2 208 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 M0QYG6 137 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 SLC31A2O15432 143 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 SAA2P0DJI9 122 aaPredicted RBP14.03□□□□□ -0.16
CPSF4-209ENST00000465132 IL7P13232 177 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 UCP3P55916 312 aa14.03□□□□□ -0.16
CPSF4-209ENST00000465132 PROK1P58294 105 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms