RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SAR1AQ9NR31 198 aa6.86□□□□□ -1.31
APP-213ENST00000464867 RCC2Q9P258 522 aaKnown RBP6.86□□□□□ -1.31
APP-213ENST00000464867 UBQLN2Q9UHD9 624 aa6.86□□□□□ -1.31
APP-213ENST00000464867 FAM223BA6NKX1 122 aa6.85□□□□□ -1.31
APP-213ENST00000464867 GGCTO75223 188 aaKnown RBP6.85□□□□□ -1.31
APP-213ENST00000464867 HBZP02008 142 aa6.85□□□□□ -1.31
APP-213ENST00000464867 MT-ND2P03891 347 aa6.85□□□□□ -1.31
APP-213ENST00000464867 MT-ND4P03905 459 aa6.85□□□□□ -1.31
APP-213ENST00000464867 EDN2P20800 178 aa6.85□□□□□ -1.31
APP-213ENST00000464867 HLA-DMBP28068 263 aa6.85□□□□□ -1.31
APP-213ENST00000464867 EPHA2P29317 976 aa6.85□□□□□ -1.31
APP-213ENST00000464867 LINC00205P59089 165 aa6.85□□□□□ -1.31
APP-213ENST00000464867 PPP1R8Q12972 351 aaKnown RBP6.85□□□□□ -1.31
APP-213ENST00000464867 PSG5Q15238 335 aa6.85□□□□□ -1.31
APP-213ENST00000464867 RSU1Q15404 277 aa6.85□□□□□ -1.31
APP-213ENST00000464867 KISS1Q15726 138 aa6.85□□□□□ -1.31
APP-213ENST00000464867 ZSCAN26Q16670 478 aa6.85□□□□□ -1.31
APP-213ENST00000464867 PIGYQ3MUY2 71 aa6.85□□□□□ -1.31
APP-213ENST00000464867 FAM106AQ4KMX7 169 aa6.85□□□□□ -1.31
APP-213ENST00000464867 ATAD3CQ5T2N8 411 aa6.85□□□□□ -1.31
APP-213ENST00000464867 TMEM244Q5VVB8 128 aa6.85□□□□□ -1.31
APP-213ENST00000464867 OR4A47Q6IF82 309 aa6.85□□□□□ -1.31
APP-213ENST00000464867 TRAT1Q6PIZ9 186 aa6.85□□□□□ -1.31
APP-213ENST00000464867 Q6ZRM9 215 aa6.85□□□□□ -1.31
APP-213ENST00000464867 LINC00596Q86U02 117 aa6.85□□□□□ -1.31
APP-213ENST00000464867 SERPINA12Q8IW75 414 aa6.85□□□□□ -1.31
APP-213ENST00000464867 FAM223AQ8IWN6 122 aa6.85□□□□□ -1.31
APP-213ENST00000464867 UXS1Q8NBZ7 420 aa6.85□□□□□ -1.31
APP-213ENST00000464867 OR13C9Q8NGT0 318 aa6.85□□□□□ -1.31
APP-213ENST00000464867 TLCD1Q96CP7 247 aa6.85□□□□□ -1.31
APP-213ENST00000464867 NSMCE2Q96MF7 247 aa6.85□□□□□ -1.31
APP-213ENST00000464867 PHB2Q99623 299 aa6.85□□□□□ -1.31
APP-213ENST00000464867 MLXQ9UH92 298 aa6.85□□□□□ -1.31
APP-213ENST00000464867 WASHC3Q9Y3C0 194 aa6.85□□□□□ -1.31
APP-213ENST00000464867 SAA2-SAA4A0A096LPE2 208 aa6.84□□□□□ -1.31
APP-213ENST00000464867 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.84□□□□□ -1.31
APP-213ENST00000464867 SULT1B1O43704 296 aa6.84□□□□□ -1.31
APP-213ENST00000464867 SPDEFO95238 335 aa6.84□□□□□ -1.31
APP-213ENST00000464867 AMBPP02760 352 aa6.84□□□□□ -1.31
APP-213ENST00000464867 SAA2P0DJI9 122 aaPredicted RBP6.84□□□□□ -1.31
APP-213ENST00000464867 RHOGP84095 191 aa6.84□□□□□ -1.31
APP-213ENST00000464867 ALKBH1Q13686 389 aaKnown RBP6.84□□□□□ -1.31
APP-213ENST00000464867 SYT6Q5T7P8 510 aaPredicted RBP6.84□□□□□ -1.31
APP-213ENST00000464867 FAM71F2Q6NXP2 309 aa6.84□□□□□ -1.31
APP-213ENST00000464867 BTNL8Q6UX41 500 aa6.84□□□□□ -1.31
APP-213ENST00000464867 ZNF497Q6ZNH5 498 aa6.84□□□□□ -1.31
APP-213ENST00000464867 ODF3L1Q8IXM7 274 aa6.84□□□□□ -1.31
APP-213ENST00000464867 PXT1Q8NFP0 134 aa6.84□□□□□ -1.31
APP-213ENST00000464867 OR2AK2Q8NG84 335 aa6.84□□□□□ -1.31
APP-213ENST00000464867 OR5B3Q8NH48 314 aa6.84□□□□□ -1.31
APP-213ENST00000464867 OR1L1Q8NH94 360 aa6.84□□□□□ -1.31
APP-213ENST00000464867 KCNG3Q8TAE7 436 aa6.84□□□□□ -1.31
APP-213ENST00000464867 FRZBQ92765 325 aa6.84□□□□□ -1.31
APP-213ENST00000464867 GPER1Q99527 375 aa6.84□□□□□ -1.31
APP-213ENST00000464867 SPAG8Q99932 426 aaPredicted RBP6.84□□□□□ -1.31
APP-213ENST00000464867 NIPSNAP1Q9BPW8 284 aa6.84□□□□□ -1.31
APP-213ENST00000464867 IFT22Q9H7X7 185 aa6.84□□□□□ -1.31
APP-213ENST00000464867 REEP1Q9H902 201 aa6.84□□□□□ -1.31
APP-213ENST00000464867 CLN6Q9NWW5 311 aa6.84□□□□□ -1.31
APP-213ENST00000464867 KCNIP1Q9NZI2 227 aa6.84□□□□□ -1.31
APP-213ENST00000464867 H2AFY2Q9P0M6 372 aaPredicted RBP6.84□□□□□ -1.31
APP-213ENST00000464867 ST3GAL6Q9Y274 331 aa6.84□□□□□ -1.31
APP-213ENST00000464867 EXOSC1Q9Y3B2 195 aaKnown RBP6.84□□□□□ -1.31
APP-213ENST00000464867 RPL36Q9Y3U8 105 aaKnown RBP6.84□□□□□ -1.31
APP-213ENST00000464867 SAMHD1Q9Y3Z3 626 aaKnown RBP6.84□□□□□ -1.31
APP-213ENST00000464867 DEFB131BA0A096LNP1 70 aa6.83□□□□□ -1.32
APP-213ENST00000464867 METTL15A6NJ78 407 aa6.83□□□□□ -1.32
APP-213ENST00000464867 PPP5D1E7EU14 171 aa6.83□□□□□ -1.32
APP-213ENST00000464867 MPPED1O15442 326 aa6.83□□□□□ -1.32
APP-213ENST00000464867 OR2C1O95371 312 aa6.83□□□□□ -1.32
APP-213ENST00000464867 SLC25A30Q5SVS4 291 aa6.83□□□□□ -1.32
APP-213ENST00000464867 ZNF691Q5VV52 312 aa6.83□□□□□ -1.32
APP-213ENST00000464867 Q6ZTC4 211 aa6.83□□□□□ -1.32
APP-213ENST00000464867 GPHB5Q86YW7 130 aa6.83□□□□□ -1.32
APP-213ENST00000464867 OR10G2Q8NGC3 310 aa6.83□□□□□ -1.32
APP-213ENST00000464867 OR13C3Q8NGS6 347 aa6.83□□□□□ -1.32
APP-213ENST00000464867 MARC2Q969Z3 335 aa6.83□□□□□ -1.32
APP-213ENST00000464867 SULT4A1Q9BR01 284 aa6.83□□□□□ -1.32
APP-213ENST00000464867 FAM192AQ9GZU8 254 aa6.83□□□□□ -1.32
APP-213ENST00000464867 AKIP1Q9NQ31 210 aa6.83□□□□□ -1.32
APP-213ENST00000464867 PIPOXQ9P0Z9 390 aa6.83□□□□□ -1.32
APP-213ENST00000464867 ABCD2Q9UBJ2 740 aa6.83□□□□□ -1.32
APP-213ENST00000464867 ZNF230Q9UIE0 474 aaPredicted RBP6.83□□□□□ -1.32
APP-213ENST00000464867 JPT1Q9UK76 154 aa6.83□□□□□ -1.32
APP-213ENST00000464867 CCDC182A6NF36 153 aa6.82□□□□□ -1.32
APP-213ENST00000464867 FAM90A23PA8MXZ1 464 aa6.82□□□□□ -1.32
APP-213ENST00000464867 RAB29O14966 203 aa6.82□□□□□ -1.32
APP-213ENST00000464867 SULT1C4O75897 302 aa6.82□□□□□ -1.32
APP-213ENST00000464867 HLA-AP01891 365 aaKnown RBP6.82□□□□□ -1.32
APP-213ENST00000464867 PPP1CCP36873 323 aaKnown RBP6.82□□□□□ -1.32
APP-213ENST00000464867 PSME3P61289 254 aa6.82□□□□□ -1.32
APP-213ENST00000464867 TMEM187Q14656 261 aa6.82□□□□□ -1.32
APP-213ENST00000464867 SERTAD4-AS1Q5TG53 156 aa6.82□□□□□ -1.32
APP-213ENST00000464867 GLT8D1Q68CQ7 371 aa6.82□□□□□ -1.32
APP-213ENST00000464867 LAMTOR1Q6IAA8 161 aa6.82□□□□□ -1.32
APP-213ENST00000464867 C8orf82Q6P1X6 216 aaPredicted RBP6.82□□□□□ -1.32
APP-213ENST00000464867 HACD2Q6Y1H2 254 aa6.82□□□□□ -1.32
APP-213ENST00000464867 GLDNQ6ZMI3 551 aaPredicted RBP6.82□□□□□ -1.32
APP-213ENST00000464867 ZNF367Q7RTV3 350 aa6.82□□□□□ -1.32
APP-213ENST00000464867 FAM220AQ7Z4H9 259 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms