RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 A6NNC1 897 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 DNASE2O00115 360 aaPredicted RBP12.07□□□□□ -0.48
COL5A1-205ENST00000464187 TSPAN4O14817 238 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 IRF2P14316 349 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 PAX9P55771 341 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 COL10A1Q03692 680 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 CLINT1Q14677 625 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 GUCA2BQ16661 112 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 IZUMO4Q1ZYL8 232 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 FAM90A1Q86YD7 464 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 HSD17B11Q8NBQ5 300 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 SLC25A31Q9H0C2 315 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 CBLN4Q9NTU7 201 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 LIN7CQ9NUP9 197 aaKnown RBP12.07□□□□□ -0.48
COL5A1-205ENST00000464187 DCAF16Q9NXF7 216 aa12.07□□□□□ -0.48
COL5A1-205ENST00000464187 CARHSP1Q9Y2V2 147 aaKnown RBP12.07□□□□□ -0.48
COL5A1-205ENST00000464187 UBR5O95071 2799 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-205ENST00000464187 IGHV3OR15-7A0A075B7D8 119 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 OOEPA6NGQ2 149 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 F8W036 122 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 NUPL2O15504 423 aaKnown RBP12.06□□□□□ -0.48
COL5A1-205ENST00000464187 CHST1O43916 411 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 IGKV1-5P01602 117 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 HBZP02008 142 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 SOD3P08294 240 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 OMGP23515 440 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 ZNF585BQ52M93 769 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 FAM53AQ6NSI3 398 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-205ENST00000464187 Q6ZRM9 215 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 ZNF295-AS1Q8N0V1 137 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 LSM10Q969L4 123 aaKnown RBP12.06□□□□□ -0.48
COL5A1-205ENST00000464187 LRBAP50851 2863 aa12.06□□□□□ -0.48
COL5A1-205ENST00000464187 HRNRQ86YZ3 2850 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-205ENST00000464187 IGKV1D-17A0A075B6S4 117 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 FAM74A7A6NL05 159 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 LRRC30A6NM36 301 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 KIAA1324LA8MWY0 1029 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-205ENST00000464187 IFNL4K9M1U5 179 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 WRBO00258 174 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 AGPAT2O15120 278 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 ZNF16P17020 682 aaPredicted RBP12.05□□□□□ -0.48
COL5A1-205ENST00000464187 PRDX2P32119 198 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 CD80P33681 288 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 GABRA2P47869 451 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 PPOXP50336 477 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 DYNLT3P51808 116 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 TAGLNQ01995 201 aaKnown RBP12.05□□□□□ -0.48
COL5A1-205ENST00000464187 FAM74A3Q4VXF1 159 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 SPAG16Q8N0X2 631 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 PUSL1Q8N0Z8 303 aaKnown RBP12.05□□□□□ -0.48
COL5A1-205ENST00000464187 CD177Q8N6Q3 437 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 OR52L2PQ8NGH6 319 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 RNASE11Q8TAA1 199 aaKnown RBP12.05□□□□□ -0.48
COL5A1-205ENST00000464187 MRGPRDQ8TDS7 321 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 CCL17Q92583 94 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 GALMQ96C23 342 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 C5orf30Q96GV9 206 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 CACFD1Q9UGQ2 172 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 ARFGEF3Q5TH69 2177 aa12.05□□□□□ -0.48
COL5A1-205ENST00000464187 RNASEK-C17orf49H0YIS7 233 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 CD5P06127 495 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 IL2RGP31785 369 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 GLIPR1P48060 266 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 FHITP49789 147 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 BAXQ07812 192 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 ZNF266Q14584 549 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 MIDNQ504T8 468 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 KRBOX4Q5JUW0 171 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 C11orf71Q6IPW1 123 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 SVBPQ8N300 66 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 ZNF645Q8N7E2 425 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 OR5C1Q8NGR4 320 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 SEC11CQ9BY50 192 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 TOLLIPQ9H0E2 274 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 CACNG5Q9UF02 275 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 USF3Q68DE3 2245 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 RAI1Q7Z5J4 1906 aaPredicted RBP12.04□□□□□ -0.48
COL5A1-205ENST00000464187 CST7O76096 145 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 CAMLGP49069 296 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 TMEM182Q6ZP80 229 aaPredicted RBP12.04□□□□□ -0.48
COL5A1-205ENST00000464187 DTX2Q86UW9 622 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 C1orf87Q8N0U7 546 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 TPRX1Q8N7U7 411 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 OR13A1Q8NGR1 328 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 OR2D2Q9H210 308 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 C19orf12Q9NSK7 152 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 TMEM106BQ9NUM4 274 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 LAMP3Q9UQV4 416 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 STRAPQ9Y3F4 350 aaKnown RBP12.04□□□□□ -0.48
COL5A1-205ENST00000464187 RFNGQ9Y644 331 aa12.04□□□□□ -0.48
COL5A1-205ENST00000464187 TANC2Q9HCD6 1990 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 DSCAML1Q8TD84 2053 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 IGHV1-69-2A0A0G2JMI3 117 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 RNF212BA8MTL3 300 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 FAM157AC9JC47 383 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 TMEM178BH3BS89 294 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 ATP6V0CP27449 155 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 SSTR5P35346 364 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 RAB5CP51148 216 aa12.03□□□□□ -0.48
COL5A1-205ENST00000464187 ZNF616Q08AN1 781 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms