RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 GNPNAT1Q96EK6 184 aaPredicted RBP8.27□□□□□ -1.08
PTPRD-207ENST00000463477 RAB40CQ96S21 281 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 C19orf12Q9NSK7 152 aa8.27□□□□□ -1.08
PTPRD-207ENST00000463477 LIN7CQ9NUP9 197 aaKnown RBP8.27□□□□□ -1.08
PTPRD-207ENST00000463477 F8P00451 2351 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 KIAA1324LA8MWY0 1029 aaPredicted RBP8.27□□□□□ -1.09
PTPRD-207ENST00000463477 E7EQL1 145 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 IFNL4K9M1U5 179 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 CDIPTO14735 213 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 SSSCA1O60232 199 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 IGLV2-14P01704 120 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 CRYAAP02489 173 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 SERPINE2P07093 398 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 OR8U9P0C7N5 309 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 CD80P33681 288 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 FLI1Q01543 452 aaPredicted RBP8.27□□□□□ -1.09
PTPRD-207ENST00000463477 MZT1Q08AG7 82 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 MIDNQ504T8 468 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 CXorf66Q5JRM2 361 aaPredicted RBP8.27□□□□□ -1.09
PTPRD-207ENST00000463477 MBNL2Q5VZF2 373 aaKnown RBP8.27□□□□□ -1.09
PTPRD-207ENST00000463477 DPPA3Q6W0C5 159 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 DTX2Q86UW9 622 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 TCTEX1D1Q8N7M0 179 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 OR8U1Q8NH10 309 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 FAM216AQ8WUB2 273 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 TMEM171Q8WVE6 324 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 COA4Q9NYJ1 87 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 TRAPPC2LQ9UL33 140 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 LAMP3Q9UQV4 416 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 FAM96BQ9Y3D0 163 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 WSB1Q9Y6I7 421 aa8.27□□□□□ -1.09
PTPRD-207ENST00000463477 CELSR1Q9NYQ6 3014 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 TMEM30CPA0ZSE6 113 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 FAM90A26D6RGX4 464 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 SIRPB1O00241 398 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 WRBO00258 174 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 NUPL2O15504 423 aaKnown RBP8.26□□□□□ -1.09
PTPRD-207ENST00000463477 MLNRO43193 412 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 DFFBO76075 338 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 HAND1O96004 215 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 SOD3P08294 240 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 CECR9P0C854 216 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 ARHGDIBP52566 201 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 PAX9P55771 341 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 TAS2R30P59541 319 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 ERVS71-1P61550 626 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 RPL23AP62750 156 aaKnown RBP8.26□□□□□ -1.09
PTPRD-207ENST00000463477 GUK1Q16774 197 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 HFEQ30201 348 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 PRSS57Q6UWY2 283 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 CLEC9AQ6UXN8 241 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 ODF3L1Q8IXM7 274 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 C11orf53Q8IXP5 236 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 GPR146Q96CH1 333 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 AIFM2Q9BRQ8 373 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 PBDC1Q9BVG4 233 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 TMEM231Q9H6L2 316 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 KCNIP1Q9NZI2 227 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 OR1A1Q9P1Q5 309 aa8.26□□□□□ -1.09
PTPRD-207ENST00000463477 ZNF469Q96JG9 3925 aaPredicted RBP8.26□□□□□ -1.09
PTPRD-207ENST00000463477 OOEPA6NGQ2 149 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 TXNL1O43396 289 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 CHST1O43916 411 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 TMEM50AO95807 157 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 PSG2P11465 335 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 ATP6V0CP27449 155 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 APOBEC3AP31941 199 aaPredicted RBP8.25□□□□□ -1.09
PTPRD-207ENST00000463477 MPV17P39210 176 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 NPBWR1P48145 328 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 NKX6-1P78426 367 aaPredicted RBP8.25□□□□□ -1.09
PTPRD-207ENST00000463477 ALKBH6Q3KRA9 238 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 ZNF718Q3SXZ3 478 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 ACP7Q6ZNF0 438 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 LURAP1LQ8IV03 231 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 HSD17B11Q8NBQ5 300 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 OR5C1Q8NGR4 320 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 ATP5SQ99766 215 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 SH3BGRL3Q9H299 93 aa8.25□□□□□ -1.09
PTPRD-207ENST00000463477 A0A0G2JRQ6 117 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 ATP6V1G2-DDX39BF2Z307 99 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 H0YL77 283 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 H7C2Y5 167 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 TNFSF12O43508 249 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 PTBP3O95758 552 aaKnown RBP8.24□□□□□ -1.09
PTPRD-207ENST00000463477 IGKV1-39P01597 117 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 PRH1P02810 166 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 IGKV1D-39P04432 117 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 OR8U8P0C7N1 319 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 SULT1A1P50225 295 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 DYNLT3P51808 116 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 ZNF616Q08AN1 781 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 TRAT1Q6PIZ9 186 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 STX12Q86Y82 276 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 FAM90A1Q86YD7 464 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 MUC15Q8N387 334 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 NUP37Q8NFH4 326 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 OR2G3Q8NGZ4 309 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 IL1F10Q8WWZ1 152 aa8.24□□□□□ -1.09
PTPRD-207ENST00000463477 PARD6GQ9BYG4 376 aaPredicted RBP8.24□□□□□ -1.09
PTPRD-207ENST00000463477 CBLN4Q9NTU7 201 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms