RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ODAMA1E959 279 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 MAP1LC3B2A6NCE7 125 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 OR5H1A6NKK0 313 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 CEBPZOSA8MTT3 80 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 PPIHO43447 177 aaKnown RBP14.19□□□□□ -0.14
ACTB-207ENST00000462494 CECR9P0C854 216 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 LINC00205P59089 165 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 FOXF2Q12947 444 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 CATR1Q13166 79 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 LTC4SQ16873 150 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 FAM90A2PQ658T7 463 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 BEND4Q6ZU67 534 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 MAP1LC3BQ9GZQ8 125 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 HSPB7Q9UBY9 170 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 SPINK9Q5DT21 86 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 ALKBH2Q6NS38 261 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 TMEM14EPQ6UXP3 125 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 OR10G4Q8NGN3 311 aa14.19□□□□□ -0.14
ACTB-207ENST00000462494 LRRC30A6NM36 301 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 HMGB3O15347 200 aaKnown RBP14.18□□□□□ -0.14
ACTB-207ENST00000462494 CYB5BO43169 146 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 GCH1P30793 250 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 GUSBP1Q15486 140 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 OR13A1Q8NGR1 328 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 ZDHHC16Q969W1 377 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 PINX1Q96BK5 328 aaKnown RBP14.18□□□□□ -0.14
ACTB-207ENST00000462494 SIRT7Q9NRC8 400 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.18□□□□□ -0.14
ACTB-207ENST00000462494 SLC39A9Q9NUM3 307 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 USF3Q68DE3 2245 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 CLN5O75503 358 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 BRWD1-AS2P59051 145 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 TLE1Q04724 770 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 EDDM3AQ14507 147 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 LHX4Q969G2 390 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 SEBOXQ9HB31 216 aaPredicted RBP14.18□□□□□ -0.14
ACTB-207ENST00000462494 NIT2Q9NQR4 276 aa14.18□□□□□ -0.14
ACTB-207ENST00000462494 ST8SIA5O15466 376 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 ZG16O60844 167 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 COX5AP20674 150 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 S100A12P80511 92 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 EIF4EBP1Q13541 118 aaPredicted RBP14.17□□□□□ -0.14
ACTB-207ENST00000462494 ZNF718Q3SXZ3 478 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 CA5BP1Q8WTZ4 195 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 PLPPR2Q96GM1 343 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 TCEAL7Q9BRU2 100 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 DCTN5Q9BTE1 182 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 VAX2Q9UIW0 290 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 PSG11Q9UQ72 335 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 DOCK11Q5JSL3 2073 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 NBEAQ8NFP9 2946 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 CXorf65A6NEN9 183 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 C1QTNF9BB2RNN3 333 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 ZNF737O75373 536 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 YIF1AO95070 293 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 IGKV1D-33P01593 117 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 IGKV1-33P01594 117 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 HOXB1P14653 301 aaPredicted RBP14.17□□□□□ -0.14
ACTB-207ENST00000462494 EIF2S3P41091 472 aaKnown RBP14.17□□□□□ -0.14
ACTB-207ENST00000462494 SMIM21Q3B7S5 101 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 Q3ZCU0 254 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 H2BFWTQ7Z2G1 175 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 MRGPRGQ86SM5 289 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 RPP25LQ8N5L8 163 aaKnown RBP14.17□□□□□ -0.14
ACTB-207ENST00000462494 DTD1Q8TEA8 209 aa14.17□□□□□ -0.14
ACTB-207ENST00000462494 LINC00473A8K010 186 aa14.16□□□□□ -0.14
ACTB-207ENST00000462494 IFNA1P01562 189 aa14.16□□□□□ -0.14
ACTB-207ENST00000462494 NDUFA6P56556 154 aa14.16□□□□□ -0.14
ACTB-207ENST00000462494 LRRC29Q8WV35 223 aa14.16□□□□□ -0.14
ACTB-207ENST00000462494 PARD6GQ9BYG4 376 aaPredicted RBP14.16□□□□□ -0.14
ACTB-207ENST00000462494 OPN3Q9H1Y3 402 aaPredicted RBP14.16□□□□□ -0.14
ACTB-207ENST00000462494 SLC25A22Q9H936 323 aa14.16□□□□□ -0.14
ACTB-207ENST00000462494 B4DEV8 164 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 AQP7O14520 342 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 P0C879 139 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 FGF7P21781 194 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 ACSM6Q6P461 480 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 ZNF610Q8N9Z0 462 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 DEFB124Q8NES8 71 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 PRR7Q8TB68 274 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 SARAFQ96BY9 339 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 SPAARA0A1B0GVQ0 90 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 CLDN14O95500 239 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 WT1P19544 449 aaPredicted RBP14.15□□□□□ -0.14
ACTB-207ENST00000462494 KITLGP21583 273 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 OR2Z1Q8NG97 314 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 OR10P1Q8NGE3 313 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 P2RX4Q99571 388 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 ZNF251Q9BRH9 671 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 TMPRSS5Q9H3S3 457 aa14.15□□□□□ -0.14
ACTB-207ENST00000462494 TRAV17A0A0B4J275 112 aa14.14□□□□□ -0.15
ACTB-207ENST00000462494 IGHV2OR16-5A0A0B4J2B6 119 aa14.14□□□□□ -0.15
ACTB-207ENST00000462494 PRR33A8MZF0 331 aa14.14□□□□□ -0.15
ACTB-207ENST00000462494 CD82P27701 267 aa14.14□□□□□ -0.15
ACTB-207ENST00000462494 PNRC1Q12796 327 aaPredicted RBP14.14□□□□□ -0.15
ACTB-207ENST00000462494 CD177Q8N6Q3 437 aa14.14□□□□□ -0.15
ACTB-207ENST00000462494 C1orf162Q8NEQ5 155 aaPredicted RBP14.14□□□□□ -0.15
ACTB-207ENST00000462494 TAAR6Q96RI8 345 aa14.14□□□□□ -0.15
ACTB-207ENST00000462494 TMEM147Q9BVK8 224 aa14.14□□□□□ -0.15
ACTB-207ENST00000462494 HEATR1Q9H583 2144 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms