RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 VAMP8Q9BV40 100 aa12.34□□□□□ -0.43
NCL-207ENST00000461347 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
NCL-207ENST00000461347 MPLP40238 635 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 CD81P60033 236 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 OR2M7Q8NG81 312 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 SAP25Q8TEE9 199 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 R3HDM4Q96D70 268 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 HES7Q9BYE0 225 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 ZNF331Q9NQX6 463 aaPredicted RBP12.33□□□□□ -0.44
NCL-207ENST00000461347 ABCA1O95477 2261 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 CNN1P51911 297 aaKnown RBP12.33□□□□□ -0.44
NCL-207ENST00000461347 OR10G8Q8NGN5 311 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 OR1L1Q8NH94 360 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 RHBDL1O75783 438 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 CRISP2P16562 243 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 WDR61Q9GZS3 305 aaKnown RBP12.33□□□□□ -0.44
NCL-207ENST00000461347 IL36GQ9NZH8 169 aa12.33□□□□□ -0.44
NCL-207ENST00000461347 M0R143 59 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 ZG16O60844 167 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 HIST1H1BP16401 226 aaKnown RBP12.32□□□□□ -0.44
NCL-207ENST00000461347 MRPL14Q6P1L8 145 aaKnown RBP12.32□□□□□ -0.44
NCL-207ENST00000461347 SLC25A40Q8TBP6 338 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 ANAPC10Q9UM13 185 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 PCDH15Q96QU1 1955 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 C3orf80F5H4A9 247 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 KBTBD11O94819 623 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 ANOS1P23352 680 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 CCKARP32238 428 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 TNFRSF9Q07011 255 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 ZNF826PQ6ZT77 177 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 LYPD6Q86Y78 171 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 DRAM1Q8N682 238 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 VSIRQ9H7M9 311 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 KLF2Q9Y5W3 355 aaPredicted RBP12.32□□□□□ -0.44
NCL-207ENST00000461347 TCL1AP56279 114 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 REC114Q7Z4M0 266 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 OR2Z1Q8NG97 314 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 IMMP1LQ96LU5 166 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 LRFN3Q9BTN0 628 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 SRD5A3Q9H8P0 318 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 SDF2L1Q9HCN8 221 aa12.32□□□□□ -0.44
NCL-207ENST00000461347 TRAV38-1A0A0B4J264 116 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 THBS3P49746 956 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 HGFACQ04756 655 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 IL15RAQ13261 267 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 PRR27Q6MZM9 219 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 PAM16Q9Y3D7 125 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 CADP27708 2225 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 SOD3P08294 240 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 COL10A1Q03692 680 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 LINC00596Q86U02 117 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 RIF1Q5UIP0 2472 aaKnown RBP12.31□□□□□ -0.44
NCL-207ENST00000461347 HIST3H3Q16695 136 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 SLC23A3Q6PIS1 610 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 ZNF525Q8N782 197 aa12.31□□□□□ -0.44
NCL-207ENST00000461347 PSMG3Q9BT73 122 aaPredicted RBP12.31□□□□□ -0.44
NCL-207ENST00000461347 REPIN1Q9BWE0 567 aaKnown RBP12.31□□□□□ -0.44
NCL-207ENST00000461347 LOC102724200A0A096LPH7 203 aaPredicted RBP12.3□□□□□ -0.44
NCL-207ENST00000461347 TRAV34A0A0B4J273 112 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 UMODP07911 640 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 OTX1P32242 354 aaPredicted RBP12.3□□□□□ -0.44
NCL-207ENST00000461347 IGFBP7Q16270 282 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 TMPRSS7Q7RTY8 843 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 TMEM183AQ8IXX5 376 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 LRRC29Q8WV35 223 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 TBX15Q96SF7 602 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 THADAQ6YHU6 1953 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 MT-CO3P00414 261 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 AMTP48728 403 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 OR4X1Q8NH49 305 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 TMEM68Q96MH6 324 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 OOEPA6NGQ2 149 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 S1PR2O95136 353 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 HBZP02008 142 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 CELA3AP09093 270 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 STARD6P59095 220 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 PAX5Q02548 391 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 SAXO1Q8IYX7 474 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 RBMXL3Q8N7X1 1067 aaKnown RBP12.3□□□□□ -0.44
NCL-207ENST00000461347 C22orf15Q8WYQ4 148 aa12.3□□□□□ -0.44
NCL-207ENST00000461347 LSM10Q969L4 123 aaKnown RBP12.3□□□□□ -0.44
NCL-207ENST00000461347 CYC1P08574 325 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 CYP2G1PQ6ZSU1 146 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 TMEM251Q8N6I4 163 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 VPS25Q9BRG1 176 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 C1QTNF5Q9BXJ0 243 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 SLC35D1Q9NTN3 355 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 ZNF318Q5VUA4 2279 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 CD1BP29016 333 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 S100A7P31151 101 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 SUMO1P63165 101 aaKnown RBP12.29□□□□□ -0.44
NCL-207ENST00000461347 LRRC75BQ2VPJ9 315 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 LYG1Q8N1E2 194 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 SCCPDHQ8NBX0 429 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 DDA1Q9BW61 102 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 CBLN4Q9NTU7 201 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 A0A0C4DFX4 3053 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 TNFSF15O95150 251 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 FBXW9Q5XUX1 488 aa12.29□□□□□ -0.44
NCL-207ENST00000461347 SPSB3Q6PJ21 355 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms