RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 UNQ5815/PRO19632Q6UWF5 114 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 OR6Q1Q8NGQ2 317 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 ARPC1AQ92747 370 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 RNF5Q99942 180 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 HDHD3Q9BSH5 251 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-216ENST00000461187 FAM103A1Q9BTL3 118 aaKnown RBP11.32□□□□□ -0.6
SMPD4-216ENST00000461187 C11orf54Q9H0W9 315 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-216ENST00000461187 GHITMQ9H3K2 345 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 OR1A1Q9P1Q5 309 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 AK3Q9UIJ7 227 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 RNF150Q9ULK6 438 aa11.32□□□□□ -0.6
SMPD4-216ENST00000461187 TRIM64CA6NLI5 447 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 SOCS1O15524 211 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 BPNT1O95861 308 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 CDK1P06493 297 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 OR8U9P0C7N5 309 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 CEACAM6P40199 344 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 PSG5Q15238 335 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 RCN1Q15293 331 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 ZNF562Q6V9R5 426 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 CEACAM19Q7Z692 300 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 LFNGQ8NES3 379 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 RHOVQ96L33 236 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 MS4A10Q96PG2 267 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 CLCC1Q96S66 551 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 LYSTQ99698 3801 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 MND1Q9BWT6 205 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 LPAR5Q9H1C0 372 aa11.31□□□□□ -0.6
SMPD4-216ENST00000461187 RIMS4Q9H426 269 aaPredicted RBP11.31□□□□□ -0.6
SMPD4-216ENST00000461187 METTL1Q9UBP6 276 aaKnown RBP11.31□□□□□ -0.6
SMPD4-216ENST00000461187 LSM2Q9Y333 95 aaKnown RBP11.31□□□□□ -0.6
SMPD4-216ENST00000461187 CA2P00918 260 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 UCHL1P09936 223 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 ZBTB25P24278 435 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 LINC00205P59089 165 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 TPPP2P59282 170 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 HLA-DRB3P79483 266 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 PITPNAQ00169 270 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 SPHARQ15513 63 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 HSD17B12Q53GQ0 312 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 OGFRL1Q5TC84 451 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-216ENST00000461187 FAM89BQ8N5H3 189 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 DRAXINQ8NBI3 349 aaPredicted RBP11.3□□□□□ -0.6
SMPD4-216ENST00000461187 OR6M1Q8NGM8 313 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 EDARADDQ8WWZ3 215 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 PTX4Q96A99 478 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
SMPD4-216ENST00000461187 GFI1Q99684 422 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 Q9N2K0 584 aa11.3□□□□□ -0.6
SMPD4-216ENST00000461187 FOXI3A8MTJ6 420 aaPredicted RBP11.29□□□□□ -0.6
SMPD4-216ENST00000461187 HSPA12AO43301 675 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 IGKV1-16P04430 117 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 TFAP2AP05549 437 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 SCTP09683 121 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 CPEP16870 476 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 TMEM50BP56557 158 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 ZNF383Q8NA42 475 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 OR4C12Q96R67 309 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 URM1Q9BTM9 101 aaKnown RBP11.29□□□□□ -0.6
SMPD4-216ENST00000461187 SLA2Q9H6Q3 261 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 HSF4Q9ULV5 492 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 MGAT4AQ9UM21 535 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 RYR2Q92736 4967 aa11.29□□□□□ -0.6
SMPD4-216ENST00000461187 SACSQ9NZJ4 4579 aa11.28□□□□□ -0.6
SMPD4-216ENST00000461187 IGKV1-6A0A0C4DH72 117 aa11.28□□□□□ -0.6
SMPD4-216ENST00000461187 PTGES3LE9PB15 166 aa11.28□□□□□ -0.6
SMPD4-216ENST00000461187 SLC17A2O00624 439 aa11.28□□□□□ -0.6
SMPD4-216ENST00000461187 CASQ2O14958 399 aaPredicted RBP11.28□□□□□ -0.6
SMPD4-216ENST00000461187 ARPC1BO15143 372 aaKnown RBP11.28□□□□□ -0.6
SMPD4-216ENST00000461187 SPDEFO95238 335 aa11.28□□□□□ -0.6
SMPD4-216ENST00000461187 RPS16P62249 146 aaKnown RBP11.28□□□□□ -0.6
SMPD4-216ENST00000461187 P2RY14Q15391 338 aa11.28□□□□□ -0.6
SMPD4-216ENST00000461187 SRSF7Q16629 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMPD4-216ENST00000461187 HAPLN4Q86UW8 402 aa11.28□□□□□ -0.6
SMPD4-216ENST00000461187 Q8N1Y9 231 aa11.28□□□□□ -0.6
SMPD4-216ENST00000461187 TSNAXQ99598 290 aaKnown RBP11.28□□□□□ -0.6
SMPD4-216ENST00000461187 ZMAT4Q9H898 229 aa11.28□□□□□ -0.6
SMPD4-216ENST00000461187 STARD9Q9P2P6 4700 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 SLC25A17O43808 307 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 IGLV1-51P01701 117 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 TRGV3P03979 118 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 ARSBP15848 533 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 CD40LGP29965 261 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 SSBP2P81877 361 aaPredicted RBP11.27□□□□□ -0.61
SMPD4-216ENST00000461187 IRF3Q14653 427 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 FXYD3Q14802 87 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 MED22Q15528 200 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 LIPKQ5VXJ0 399 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 TMEM91Q6ZNR0 172 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 PDPNQ86YL7 162 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 TMEM203Q969S6 136 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 ARHGAP5-AS1Q96IT6 56 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 TM2D3Q9BRN9 247 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 C12orf4Q9NQ89 552 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 ZNF221Q9UK13 617 aa11.27□□□□□ -0.61
SMPD4-216ENST00000461187 APOA2P02652 100 aa11.26□□□□□ -0.61
SMPD4-216ENST00000461187 VEGFCP49767 419 aa11.26□□□□□ -0.61
SMPD4-216ENST00000461187 POC5Q8NA72 575 aa11.26□□□□□ -0.61
SMPD4-216ENST00000461187 OR5T1Q8NG75 326 aa11.26□□□□□ -0.61
SMPD4-216ENST00000461187 GRPEL2Q8TAA5 225 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms