RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 H7C2Y5 167 aa17.68■□□□□ 0.42
PTPN4-207ENST00000460162 GSTP1P09211 210 aaKnown RBP17.68■□□□□ 0.42
PTPN4-207ENST00000460162 NHLRC4P0CG21 123 aaPredicted RBP17.68■□□□□ 0.42
PTPN4-207ENST00000460162 CHRNA7P36544 502 aa17.68■□□□□ 0.42
PTPN4-207ENST00000460162 CEACAM6P40199 344 aa17.68■□□□□ 0.42
PTPN4-207ENST00000460162 CX3CL1P78423 397 aa17.68■□□□□ 0.42
PTPN4-207ENST00000460162 NRG4Q8WWG1 115 aa17.68■□□□□ 0.42
PTPN4-207ENST00000460162 PTX4Q96A99 478 aa17.68■□□□□ 0.42
PTPN4-207ENST00000460162 OR5B12Q96R08 314 aa17.68■□□□□ 0.42
PTPN4-207ENST00000460162 C11orf54Q9H0W9 315 aaPredicted RBP17.68■□□□□ 0.42
PTPN4-207ENST00000460162 ZNF256Q9Y2P7 627 aaPredicted RBP17.68■□□□□ 0.42
PTPN4-207ENST00000460162 SPDEFO95238 335 aa17.67■□□□□ 0.42
PTPN4-207ENST00000460162 CALRP27797 417 aaKnown RBP17.67■□□□□ 0.42
PTPN4-207ENST00000460162 VEGFCP49767 419 aa17.67■□□□□ 0.42
PTPN4-207ENST00000460162 TMEM50BP56557 158 aa17.67■□□□□ 0.42
PTPN4-207ENST00000460162 PYHIN1Q6K0P9 492 aa17.67■□□□□ 0.42
PTPN4-207ENST00000460162 PRSS48Q7RTY5 328 aa17.67■□□□□ 0.42
PTPN4-207ENST00000460162 OR56B1Q8NGI3 324 aa17.67■□□□□ 0.42
PTPN4-207ENST00000460162 ARHGAP5-AS1Q96IT6 56 aa17.67■□□□□ 0.42
PTPN4-207ENST00000460162 CMSS1Q9BQ75 279 aaKnown RBP17.67■□□□□ 0.42
PTPN4-207ENST00000460162 PECRQ9BY49 303 aa17.67■□□□□ 0.42
PTPN4-207ENST00000460162 RNF150Q9ULK6 438 aa17.67■□□□□ 0.42
PTPN4-207ENST00000460162 SOX15O60248 233 aa17.66■□□□□ 0.42
PTPN4-207ENST00000460162 SCTP09683 121 aa17.66■□□□□ 0.42
PTPN4-207ENST00000460162 CRHBPP24387 322 aa17.66■□□□□ 0.42
PTPN4-207ENST00000460162 TMEM267Q0VDI3 215 aaPredicted RBP17.66■□□□□ 0.42
PTPN4-207ENST00000460162 CD200R1LQ6Q8B3 271 aa17.66■□□□□ 0.42
PTPN4-207ENST00000460162 ABHD5Q8WTS1 349 aa17.66■□□□□ 0.42
PTPN4-207ENST00000460162 FAM3DQ96BQ1 224 aa17.66■□□□□ 0.42
PTPN4-207ENST00000460162 CCDC90BQ9GZT6 254 aa17.66■□□□□ 0.42
PTPN4-207ENST00000460162 LGALS1P09382 135 aaKnown RBP17.65■□□□□ 0.42
PTPN4-207ENST00000460162 PSMD7P51665 324 aa17.65■□□□□ 0.42
PTPN4-207ENST00000460162 CLDN12P56749 244 aa17.65■□□□□ 0.42
PTPN4-207ENST00000460162 FABP5Q01469 135 aa17.65■□□□□ 0.42
PTPN4-207ENST00000460162 MGLLQ99685 303 aa17.65■□□□□ 0.42
PTPN4-207ENST00000460162 ACOT13Q9NPJ3 140 aa17.65■□□□□ 0.42
PTPN4-207ENST00000460162 ZNF221Q9UK13 617 aa17.65■□□□□ 0.42
PTPN4-207ENST00000460162 NUBP2Q9Y5Y2 271 aa17.65■□□□□ 0.42
PTPN4-207ENST00000460162 V9GY05 133 aa17.65■□□□□ 0.42
PTPN4-207ENST00000460162 NBEAL2Q6ZNJ1 2754 aa17.65■□□□□ 0.42
PTPN4-207ENST00000460162 OVOL1O14753 267 aa17.64■□□□□ 0.41
PTPN4-207ENST00000460162 LDLRAD4O15165 306 aa17.64■□□□□ 0.41
PTPN4-207ENST00000460162 SERPINB10P48595 397 aa17.64■□□□□ 0.41
PTPN4-207ENST00000460162 TBCEQ15813 527 aaPredicted RBP17.64■□□□□ 0.41
PTPN4-207ENST00000460162 ZNF429Q86V71 674 aa17.64■□□□□ 0.41
PTPN4-207ENST00000460162 PDPNQ86YL7 162 aa17.64■□□□□ 0.41
PTPN4-207ENST00000460162 ZNF436-AS1Q8NC38 126 aaPredicted RBP17.64■□□□□ 0.41
PTPN4-207ENST00000460162 TSNAXQ99598 290 aaKnown RBP17.64■□□□□ 0.41
PTPN4-207ENST00000460162 TOLLIPQ9H0E2 274 aa17.64■□□□□ 0.41
PTPN4-207ENST00000460162 METTL1Q9UBP6 276 aaKnown RBP17.64■□□□□ 0.41
PTPN4-207ENST00000460162 A3GALT2U3KPV4 340 aa17.64■□□□□ 0.41
PTPN4-207ENST00000460162 IGKV1-6A0A0C4DH72 117 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 TRDCB7Z8K6 153 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 LINC01619G3V211 115 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 FCN1O00602 326 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 DENRO43583 198 aaKnown RBP17.63■□□□□ 0.41
PTPN4-207ENST00000460162 PROP1O75360 226 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 APOA2P02652 100 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 TFAP2AP05549 437 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 EGR2P11161 476 aaPredicted RBP17.63■□□□□ 0.41
PTPN4-207ENST00000460162 PSG5Q15238 335 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 AKIRIN2Q53H80 203 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 ACTBL2Q562R1 376 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 PLAC9Q5JTB6 97 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 PPP1R27Q86WC6 154 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 OR4A4PQ8NGN8 299 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 DCUN1D4Q92564 292 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 ALX4Q9H161 411 aaPredicted RBP17.63■□□□□ 0.41
PTPN4-207ENST00000460162 VCX3BQ9H321 246 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 RDH8Q9NYR8 311 aa17.63■□□□□ 0.41
PTPN4-207ENST00000460162 CA2P00918 260 aa17.62■□□□□ 0.41
PTPN4-207ENST00000460162 IGKV1-16P04430 117 aa17.62■□□□□ 0.41
PTPN4-207ENST00000460162 MRPS15P82914 257 aaKnown RBP17.62■□□□□ 0.41
PTPN4-207ENST00000460162 C2orf76Q3KRA6 126 aa17.62■□□□□ 0.41
PTPN4-207ENST00000460162 UNQ5815/PRO19632Q6UWF5 114 aa17.62■□□□□ 0.41
PTPN4-207ENST00000460162 ZNF562Q6V9R5 426 aa17.62■□□□□ 0.41
PTPN4-207ENST00000460162 ZNF383Q8NA42 475 aa17.62■□□□□ 0.41
PTPN4-207ENST00000460162 DRAXINQ8NBI3 349 aaPredicted RBP17.62■□□□□ 0.41
PTPN4-207ENST00000460162 GAB2Q9UQC2 676 aa17.62■□□□□ 0.41
PTPN4-207ENST00000460162 U3KQK5 164 aa17.62■□□□□ 0.41
PTPN4-207ENST00000460162 SORL1Q92673 2214 aa17.62■□□□□ 0.41
PTPN4-207ENST00000460162 TMEM272A0A1B0GTI8 110 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 ERICH4A6NGS2 130 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 DIRAS3O95661 229 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 MAP2K4P45985 399 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 ZNF367Q7RTV3 350 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 CASTOR1Q8WTX7 329 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 ARPC1AQ92747 370 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 FAM103A1Q9BTL3 118 aaKnown RBP17.61■□□□□ 0.41
PTPN4-207ENST00000460162 CABLES2Q9BTV7 478 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 SLA2Q9H6Q3 261 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 TPSG1Q9NRR2 321 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 RAB22AQ9UL26 194 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 BLOC1S6Q9UL45 172 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 STAB2Q8WWQ8 2551 aa17.61■□□□□ 0.41
PTPN4-207ENST00000460162 FABP7O15540 132 aa17.6■□□□□ 0.41
PTPN4-207ENST00000460162 LY86O95711 162 aa17.6■□□□□ 0.41
PTPN4-207ENST00000460162 CD3GP09693 182 aa17.6■□□□□ 0.41
PTPN4-207ENST00000460162 CD40LGP29965 261 aa17.6■□□□□ 0.41
PTPN4-207ENST00000460162 HSPA13P48723 471 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms