RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 UNQ9165/PRO28630Q6UXU0 137 aa11.51□□□□□ -0.57
SF3B4-202ENST00000457312 ASCL4Q6XD76 172 aa11.51□□□□□ -0.57
SF3B4-202ENST00000457312 SSX6Q7RTT6 188 aa11.51□□□□□ -0.57
SF3B4-202ENST00000457312 SLC35F2Q8IXU6 374 aa11.51□□□□□ -0.57
SF3B4-202ENST00000457312 TMEM163Q8TC26 289 aa11.51□□□□□ -0.57
SF3B4-202ENST00000457312 NIPSNAP1Q9BPW8 284 aa11.51□□□□□ -0.57
SF3B4-202ENST00000457312 JPT1Q9UK76 154 aa11.51□□□□□ -0.57
SF3B4-202ENST00000457312 OR4C46A6NHA9 309 aa11.5□□□□□ -0.57
SF3B4-202ENST00000457312 ARL3P36405 182 aa11.5□□□□□ -0.57
SF3B4-202ENST00000457312 KISS1Q15726 138 aa11.5□□□□□ -0.57
SF3B4-202ENST00000457312 FAM106AQ4KMX7 169 aa11.5□□□□□ -0.57
SF3B4-202ENST00000457312 C8orf82Q6P1X6 216 aaPredicted RBP11.5□□□□□ -0.57
SF3B4-202ENST00000457312 PXT1Q8NFP0 134 aa11.5□□□□□ -0.57
SF3B4-202ENST00000457312 OR4K15Q8NH41 348 aa11.5□□□□□ -0.57
SF3B4-202ENST00000457312 NEK7Q8TDX7 302 aa11.5□□□□□ -0.57
SF3B4-202ENST00000457312 MRPL27Q9P0M9 148 aaKnown RBP11.5□□□□□ -0.57
SF3B4-202ENST00000457312 TRAPPC2LQ9UL33 140 aa11.5□□□□□ -0.57
SF3B4-202ENST00000457312 PKHD1L1Q86WI1 4243 aa11.49□□□□□ -0.57
SF3B4-202ENST00000457312 FAM229AH3BQW9 127 aa11.49□□□□□ -0.57
SF3B4-202ENST00000457312 TGOLN2O43493 480 aa11.49□□□□□ -0.57
SF3B4-202ENST00000457312 RCC1P18754 421 aaPredicted RBP11.49□□□□□ -0.57
SF3B4-202ENST00000457312 CRISP1P54107 249 aa11.49□□□□□ -0.57
SF3B4-202ENST00000457312 FAM3BP58499 235 aaPredicted RBP11.49□□□□□ -0.57
SF3B4-202ENST00000457312 ZNF691Q5VV52 312 aa11.49□□□□□ -0.57
SF3B4-202ENST00000457312 CD300LDQ6UXZ3 194 aa11.49□□□□□ -0.57
SF3B4-202ENST00000457312 C5orf24Q7Z6I8 188 aa11.49□□□□□ -0.57
SF3B4-202ENST00000457312 NECAP1Q8NC96 275 aa11.49□□□□□ -0.57
SF3B4-202ENST00000457312 PHB2Q99623 299 aa11.49□□□□□ -0.57
SF3B4-202ENST00000457312 NICN1Q9BSH3 213 aa11.49□□□□□ -0.57
SF3B4-202ENST00000457312 X6R8D5 127 aa11.49□□□□□ -0.57
SF3B4-202ENST00000457312 FAT3Q8TDW7 4589 aa11.48□□□□□ -0.57
SF3B4-202ENST00000457312 C15orf61A6NNL5 157 aa11.48□□□□□ -0.57
SF3B4-202ENST00000457312 ST8SIA5O15466 376 aa11.48□□□□□ -0.57
SF3B4-202ENST00000457312 KRT8P05787 483 aa11.48□□□□□ -0.57
SF3B4-202ENST00000457312 RBM11P57052 281 aaKnown RBP11.48□□□□□ -0.57
SF3B4-202ENST00000457312 GINS1Q14691 196 aa11.48□□□□□ -0.57
SF3B4-202ENST00000457312 DMKNQ6E0U4 476 aaPredicted RBP11.48□□□□□ -0.57
SF3B4-202ENST00000457312 ST3GAL6Q9Y274 331 aa11.48□□□□□ -0.57
SF3B4-202ENST00000457312 EXOSC1Q9Y3B2 195 aaKnown RBP11.48□□□□□ -0.57
SF3B4-202ENST00000457312 A0A0G2JND7 137 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 ZNF705EA8MWA4 302 aaPredicted RBP11.47□□□□□ -0.57
SF3B4-202ENST00000457312 ZNF670-ZNF695F2Z2N8 137 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 GEMIN2O14893 280 aaKnown RBP11.47□□□□□ -0.57
SF3B4-202ENST00000457312 YPEL1O60688 119 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 OR2J3O76001 311 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 IGLV2-23P01705 113 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 IGHV3-23P01764 117 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 CRYGBP07316 175 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 CPEP16870 476 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 BTF3P20290 206 aaKnown RBP11.47□□□□□ -0.57
SF3B4-202ENST00000457312 RPS27AP62979 156 aaKnown RBP11.47□□□□□ -0.57
SF3B4-202ENST00000457312 HTD2P86397 168 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 NHLRC3Q5JS37 347 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 LY6G6FQ5SQ64 297 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 SLC25A30Q5SVS4 291 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 ATAD3CQ5T2N8 411 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 TRAT1Q6PIZ9 186 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 STX19Q8N4C7 294 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 OR2AK2Q8NG84 335 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 FAM210BQ96KR6 192 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 YPEL2Q96QA6 119 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 YTHDF1Q9BYJ9 559 aaKnown RBP11.47□□□□□ -0.57
SF3B4-202ENST00000457312 TAF9BQ9HBM6 251 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 ABCD2Q9UBJ2 740 aa11.47□□□□□ -0.57
SF3B4-202ENST00000457312 LPCAT4Q643R3 524 aa11.46□□□□□ -0.57
SF3B4-202ENST00000457312 CLEC19AQ6UXS0 136 aa11.46□□□□□ -0.57
SF3B4-202ENST00000457312 GORASP2Q9H8Y8 452 aa11.46□□□□□ -0.57
SF3B4-202ENST00000457312 CLN6Q9NWW5 311 aa11.46□□□□□ -0.57
SF3B4-202ENST00000457312 PIPOXQ9P0Z9 390 aa11.46□□□□□ -0.57
SF3B4-202ENST00000457312 F8W735 103 aaPredicted RBP11.45□□□□□ -0.58
SF3B4-202ENST00000457312 GABRPO00591 440 aa11.45□□□□□ -0.58
SF3B4-202ENST00000457312 RAB29O14966 203 aa11.45□□□□□ -0.58
SF3B4-202ENST00000457312 HMGN1P05114 100 aa11.45□□□□□ -0.58
SF3B4-202ENST00000457312 RSU1Q15404 277 aa11.45□□□□□ -0.58
SF3B4-202ENST00000457312 GAPTQ8N292 157 aa11.45□□□□□ -0.58
SF3B4-202ENST00000457312 OR51A4Q8NGJ6 313 aa11.45□□□□□ -0.58
SF3B4-202ENST00000457312 TNFAIP8L1Q8WVP5 186 aa11.45□□□□□ -0.58
SF3B4-202ENST00000457312 TLCD1Q96CP7 247 aa11.45□□□□□ -0.58
SF3B4-202ENST00000457312 HOPXQ9BPY8 73 aaPredicted RBP11.45□□□□□ -0.58
SF3B4-202ENST00000457312 SAR1AQ9NR31 198 aa11.45□□□□□ -0.58
SF3B4-202ENST00000457312 MAS1P04201 325 aa11.44□□□□□ -0.58
SF3B4-202ENST00000457312 GIG44P09565 113 aaPredicted RBP11.44□□□□□ -0.58
SF3B4-202ENST00000457312 GALP22466 123 aa11.44□□□□□ -0.58
SF3B4-202ENST00000457312 FUSP35637 526 aaKnown RBP eCLIP11.44□□□□□ -0.58
SF3B4-202ENST00000457312 ELLP55199 621 aaPredicted RBP11.44□□□□□ -0.58
SF3B4-202ENST00000457312 CROCCP2Q86T23 111 aa11.44□□□□□ -0.58
SF3B4-202ENST00000457312 ZNRF2Q8NHG8 242 aa11.44□□□□□ -0.58
SF3B4-202ENST00000457312 PTTG2Q9NZH5 202 aa11.44□□□□□ -0.58
SF3B4-202ENST00000457312 S4R3C0 116 aa11.44□□□□□ -0.58
SF3B4-202ENST00000457312 MPPED1O15442 326 aa11.43□□□□□ -0.58
SF3B4-202ENST00000457312 MYOD1P15172 320 aa11.43□□□□□ -0.58
SF3B4-202ENST00000457312 CDK5Q00535 292 aa11.43□□□□□ -0.58
SF3B4-202ENST00000457312 GK3PQ14409 553 aa11.43□□□□□ -0.58
SF3B4-202ENST00000457312 TMEM244Q5VVB8 128 aa11.43□□□□□ -0.58
SF3B4-202ENST00000457312 LAMTOR1Q6IAA8 161 aa11.43□□□□□ -0.58
SF3B4-202ENST00000457312 PDPNQ86YL7 162 aa11.43□□□□□ -0.58
SF3B4-202ENST00000457312 DRAXINQ8NBI3 349 aaPredicted RBP11.43□□□□□ -0.58
SF3B4-202ENST00000457312 OR52N1Q8NH53 320 aa11.43□□□□□ -0.58
SF3B4-202ENST00000457312 TBX5Q99593 518 aa11.43□□□□□ -0.58
SF3B4-202ENST00000457312 FAM192AQ9GZU8 254 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms