RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 DERL3Q96Q80 235 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 ZNF587Q96SQ5 575 aaPredicted RBP6.51□□□□□ -1.37
BRCC3-208ENST00000453705 PTGES2Q9H7Z7 377 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 METTL1Q9UBP6 276 aaKnown RBP6.51□□□□□ -1.37
BRCC3-208ENST00000453705 SDK2Q58EX2 2172 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 SDK1Q7Z5N4 2213 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 YLPM1P49750 1951 aaKnown RBP6.51□□□□□ -1.37
BRCC3-208ENST00000453705 IGHV3-20A0A0C4DH32 117 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 RHODO00212 210 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 XKRYO14609 159 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 ATG12O94817 140 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 MT-CO3P00414 261 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 GCGP01275 180 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 CCL4P13236 92 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 RPL8P62917 257 aaKnown RBP6.51□□□□□ -1.37
BRCC3-208ENST00000453705 SLC35A1P78382 337 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 DNLZQ5SXM8 178 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 SPATA31B1PQ5VZV4 182 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 SFXN4Q6P4A7 337 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 Q6ZS46 218 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 SCCPDHQ8NBX0 429 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 FGFBP3Q8TAT2 258 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 ZNF502Q8TBZ5 544 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 C15orf40Q8WUR7 153 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 C4orf45Q96LM5 186 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 OXGR1Q96P68 337 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 SCGB3A2Q96PL1 93 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 RASL11BQ9BPW5 248 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 CMSS1Q9BQ75 279 aaKnown RBP6.51□□□□□ -1.37
BRCC3-208ENST00000453705 ULBP3Q9BZM4 244 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 NPFFR1Q9GZQ6 430 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 MOB1AQ9H8S9 216 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 FLVCR1Q9Y5Y0 555 aa6.51□□□□□ -1.37
BRCC3-208ENST00000453705 ANKRD20A5PA0PJZ0 165 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 CDC14CA4D256 554 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 PRR32B1ATL7 298 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 J3QLW9 94 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 HSD17B6O14756 317 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 TRAF3IP2O43734 574 aaPredicted RBP6.5□□□□□ -1.37
BRCC3-208ENST00000453705 PLAUP00749 431 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 IL6RP08887 468 aaPredicted RBP6.5□□□□□ -1.37
BRCC3-208ENST00000453705 ZNF19P17023 458 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 CXCL3P19876 107 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 SULT1A1P50225 295 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 SULT1A2P50226 295 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 ZNF84P51523 738 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 PKIAP61925 76 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 HSF1Q00613 529 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 OR2F1Q13607 317 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 Q499Y3 187 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 HIST2H3PS2Q5TEC6 136 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 SLC18B1Q6NT16 456 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 KCTD18Q6PI47 426 aaPredicted RBP6.5□□□□□ -1.37
BRCC3-208ENST00000453705 HAGHLQ6PII5 290 aaPredicted RBP6.5□□□□□ -1.37
BRCC3-208ENST00000453705 ADAMTSL5Q6ZMM2 481 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 NR2C2APQ86WQ0 139 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 ZFP41Q8N8Y5 198 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 CT55Q8WUE5 264 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 RGP1Q92546 391 aaPredicted RBP6.5□□□□□ -1.37
BRCC3-208ENST00000453705 TMEM54Q969K7 222 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 REEP6Q96HR9 211 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 KNL1Q8NG31 2342 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 OR2M5A3KFT3 312 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 MAP1LC3B2A6NCE7 125 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 OR4C46A6NHA9 309 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 TRAPPC2LH3BP13 241 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 FCN1O00602 326 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 NUDT14O95848 222 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 CRYBA1P05813 215 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 B3GALT5-AS1P59052 145 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 RAB5BP61020 215 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 HIST1H3AP68431 136 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 MRPS10P82664 201 aaKnown RBP6.5□□□□□ -1.37
BRCC3-208ENST00000453705 FAM27E3Q08E93 113 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 CEACAM21Q3KPI0 293 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 C10orf91Q5T1B1 145 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 C1orf195Q5TG92 126 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 ARL9Q6T311 187 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 HIST2H3AQ71DI3 136 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 CEACAM19Q7Z692 300 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 OSR2Q8N2R0 312 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 SVBPQ8N300 66 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 FTMTQ8N4E7 242 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 ZADH2Q8N4Q0 377 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 RFLNBQ8N5W9 214 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 OR2G2Q8NGZ5 317 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 MAP1LC3BQ9GZQ8 125 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 LPAR5Q9H1C0 372 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 KCNS2Q9ULS6 477 aa6.5□□□□□ -1.37
BRCC3-208ENST00000453705 PTPRBP23467 1997 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 FAM166BA8MTA8 275 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 CDS2O95674 445 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 IGFBP3P17936 291 aaPredicted RBP6.49□□□□□ -1.37
BRCC3-208ENST00000453705 EDNRAP25101 427 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 HOXD3P31249 432 aaPredicted RBP6.49□□□□□ -1.37
BRCC3-208ENST00000453705 HCCSP53701 268 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 DEFA5Q01523 94 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 FMODQ06828 376 aa6.49□□□□□ -1.37
BRCC3-208ENST00000453705 UBE2V2Q15819 145 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms