RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ARPC4P59998 168 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 ACTBP60709 375 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 BLCAPP62952 87 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 SRSF7Q16629 238 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 LDLRAD2Q5SZI1 272 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 C16orf82Q7Z2V1 217 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 OR4A4PQ8NGN8 299 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 OR5H2Q8NGV7 314 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 GALMQ96C23 342 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 OR2S2Q9NQN1 319 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 GFOD1Q9NXC2 390 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 EHFQ9NZC4 300 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 GNG12Q9UBI6 72 aa10.99□□□□□ -0.65
PDLIM2-213ENST00000448520 ANKRD20A5PA0PJZ0 165 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 ADARB2-AS1A8MUL3 147 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 ZNF736B4DX44 427 aaPredicted RBP10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 VDAC2P45880 294 aaPredicted RBP10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 CD83Q01151 205 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 IFITM3Q01628 133 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 KLF9Q13886 244 aaPredicted RBP10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 CDK10Q15131 360 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 TRIQKQ629K1 86 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 ZNF57Q68EA5 555 aaPredicted RBP10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 ZNF554Q86TJ5 538 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 TMEM229BQ8NBD8 167 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 OR5AP2Q8NGF4 316 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 CREB3L1Q96BA8 519 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 AKR1E2Q96JD6 320 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 TMEM133Q9H2Q1 129 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 MGAT4AQ9UM21 535 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 HILPDAQ9Y5L2 63 aa10.98□□□□□ -0.65
PDLIM2-213ENST00000448520 TRBV6-7A0A0A0MS04 114 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 IGHV2-26A0A0B4J1V2 119 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 HSPA12AO43301 675 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 RAB3DO95716 219 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 CD33P20138 364 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 HTR1DP28221 377 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 CEACAM6P40199 344 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 OR3A3P47888 321 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 TAS2R19P59542 299 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 MORN2Q502X0 79 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 STEAP1BQ6NZ63 245 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 H1FOOQ8IZA3 346 aaPredicted RBP10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 ZNF439Q8NDP4 499 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 OR5AU1Q8NGC0 362 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 OR4C16Q8NGL9 310 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 GINS4Q9BRT9 223 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 CLEC7AQ9BXN2 247 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 AURKAIP1Q9NWT8 199 aaPredicted RBP10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 RDH8Q9NYR8 311 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 JPT1Q9UK76 154 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 PSG11Q9UQ72 335 aa10.97□□□□□ -0.65
PDLIM2-213ENST00000448520 ST8SIA5O15466 376 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 CD74P04233 296 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 ZNF735P0CB33 412 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 OR5H8P0DN80 308 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 AADACP22760 399 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 FCGR2CP31995 323 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 BRS3P32247 399 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 ARHGDIBP52566 201 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 ZNF134P52741 427 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 TAS2R46P59540 309 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 HTD2P86397 168 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 SSBP1Q04837 148 aaKnown RBP10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 RNASE10Q5GAN6 216 aaKnown RBP10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 Q6ZS46 218 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 CENPVQ7Z7K6 275 aaPredicted RBP10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 ABHD12Q8N2K0 398 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 TOMM5Q8N4H5 51 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 OR10A7Q8NGE5 316 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 OR56B4Q8NH76 319 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 OR10J5Q8NHC4 309 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 CAPSLQ8WWF8 208 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 CCDC32Q9BV29 185 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 HRASLSQ9HDD0 168 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 DPM3Q9P2X0 92 aa10.96□□□□□ -0.65
PDLIM2-213ENST00000448520 A0A087X0M5 115 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 IGKV1D-13A0A0B4J2D9 117 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 A0A1B0GX30 115 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 YPEL1O60688 119 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 UPK1BO75841 260 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 AMY2AP04746 511 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 AKAIN1P0CW23 69 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 IGKV1-13P0DP09 117 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 ZBTB25P24278 435 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 CD34P28906 385 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 INPP1P49441 399 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 DYRK1AQ13627 763 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 CT45A1Q5HYN5 189 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 STEAP3Q658P3 488 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 ZNF660Q6AZW8 331 aaPredicted RBP10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 OVCH2Q7RTZ1 564 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 OR52M1Q8NGK5 317 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 CT45A3Q8NHU0 189 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 ZNF596Q8TC21 504 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 YPEL2Q96QA6 119 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 C11orf54Q9H0W9 315 aaPredicted RBP10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 RAB9BQ9NP90 201 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 RNF150Q9ULK6 438 aa10.95□□□□□ -0.66
PDLIM2-213ENST00000448520 TSSC4Q9Y5U2 329 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms