RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 FAM90A13PP0C7W8 464 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 FAM90A14PP0C7W9 464 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 FAM90A24PP0C7X0 464 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 RIPPLY2Q5TAB7 128 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 FAM53AQ6NSI3 398 aaPredicted RBP13.41□□□□□ -0.26
CHRD-205ENST00000448472 OR5R1Q8NH85 324 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 FKBP11Q9NYL4 201 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 A8MWP6 167 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 EREGO14944 169 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 ZG16O60844 167 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 PFN1P07737 140 aaKnown RBP13.41□□□□□ -0.26
CHRD-205ENST00000448472 OR3A1P47881 315 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 DRAM1Q8N682 238 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 MS4A10Q96PG2 267 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 NDUFAF3Q9BU61 184 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 MSL2Q9HCI7 577 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 DEPPQ9NTK1 212 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 EXPH5Q8NEV8 1989 aa13.41□□□□□ -0.26
CHRD-205ENST00000448472 CTXND1A0A1B0GTU2 59 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 GRIFINA4D1Z8 144 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 RAMP3O60896 148 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 IGHV3-13P01766 116 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 IGHV3-7P01780 117 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 GABRA2P47869 451 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 ZNF295-AS1Q8N0V1 137 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 SPEM1Q8N4L4 309 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 TPRX1Q8N7U7 411 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 WDR54Q9H977 334 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 TRAV38-1A0A0B4J264 116 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 NDUFB4O95168 129 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 WNT5AP41221 380 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 CNN1P51911 297 aaKnown RBP13.4□□□□□ -0.26
CHRD-205ENST00000448472 H2BFWTQ7Z2G1 175 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 HES7Q9BYE0 225 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 PRR14LQ5THK1 2151 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 PINLYPA6NC86 204 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 SLC25A6P12236 298 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 B3GALT5-AS1P59052 145 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 PPP1CBP62140 327 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 NOL4LQ96MY1 436 aaPredicted RBP13.4□□□□□ -0.26
CHRD-205ENST00000448472 CDH20Q9HBT6 801 aa13.4□□□□□ -0.26
CHRD-205ENST00000448472 GPR179Q6PRD1 2367 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 LRP5LA4QPB2 252 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 ZNF25P17030 456 aaPredicted RBP13.39□□□□□ -0.27
CHRD-205ENST00000448472 HOXA6P31267 233 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 TNFRSF9Q07011 255 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 IL11RAQ14626 422 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 LPAL2Q16609 132 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 ACOT6Q3I5F7 207 aaPredicted RBP13.39□□□□□ -0.27
CHRD-205ENST00000448472 TOMM20LQ6UXN7 152 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 ZNF503-AS2A6NEH8 195 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 PATE3B3GLJ2 98 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 DNPH1O43598 174 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 OR2H2O95918 312 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 CDC34P49427 236 aaPredicted RBP13.39□□□□□ -0.27
CHRD-205ENST00000448472 LINC00205P59089 165 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 GCSAMLQ5JQS6 135 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 DTD1Q8TEA8 209 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 IL17BQ9UHF5 180 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 MDFIC2A0A1B0GVS7 189 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 SPINK4O60575 86 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 FGF5P12034 268 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 THBS3P49746 956 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 TCF23Q7RTU1 214 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 TMEM147Q9BVK8 224 aa13.39□□□□□ -0.27
CHRD-205ENST00000448472 BOKQ9UMX3 212 aaPredicted RBP13.39□□□□□ -0.27
CHRD-205ENST00000448472 GCGP01275 180 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 TFF1P04155 84 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 HOXA4Q00056 320 aaPredicted RBP13.38□□□□□ -0.27
CHRD-205ENST00000448472 ZNF585BQ52M93 769 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 OR1L1Q8NH94 360 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 SGMS2Q8NHU3 365 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 LSM10Q969L4 123 aaKnown RBP13.38□□□□□ -0.27
CHRD-205ENST00000448472 ZDHHC11Q9H8X9 412 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 TCFL5Q9UL49 500 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 NUFIP2Q7Z417 695 aaKnown RBP13.38□□□□□ -0.27
CHRD-205ENST00000448472 MED12LQ86YW9 2145 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 TMEM256Q8N2U0 113 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 OR52L2PQ8NGH6 319 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 SAMD10Q9BYL1 202 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 OBP2BQ9NPH6 170 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 MUC3AQ02505 3323 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 LOC102723996A0A087X1L8 192 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 RNF212BA8MTL3 300 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 PDLIM3Q53GG5 364 aaPredicted RBP13.38□□□□□ -0.27
CHRD-205ENST00000448472 SAP25Q8TEE9 199 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 SPSB4Q96A44 273 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 DERL1Q9BUN8 251 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 HINT2Q9BX68 163 aa13.38□□□□□ -0.27
CHRD-205ENST00000448472 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.38□□□□□ -0.27
CHRD-205ENST00000448472 COL5A1P20908 1838 aaPredicted RBP13.37□□□□□ -0.27
CHRD-205ENST00000448472 S1PR2O95136 353 aa13.37□□□□□ -0.27
CHRD-205ENST00000448472 KITLGP21583 273 aa13.37□□□□□ -0.27
CHRD-205ENST00000448472 ATP5G3P48201 142 aa13.37□□□□□ -0.27
CHRD-205ENST00000448472 CATR1Q13166 79 aa13.37□□□□□ -0.27
CHRD-205ENST00000448472 TBX15Q96SF7 602 aa13.37□□□□□ -0.27
CHRD-205ENST00000448472 MBP02144 154 aa13.37□□□□□ -0.27
CHRD-205ENST00000448472 EDDM3AQ14507 147 aa13.37□□□□□ -0.27
CHRD-205ENST00000448472 ABHD17BQ5VST6 288 aa13.37□□□□□ -0.27
CHRD-205ENST00000448472 MRGPRDQ8TDS7 321 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms