RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 TMEM45BQ96B21 275 aa6.82□□□□□ -1.32
SMG1-202ENST00000446231 OCIAD1Q9NX40 245 aa6.82□□□□□ -1.32
SMG1-202ENST00000446231 TIMM9Q9Y5J7 89 aa6.82□□□□□ -1.32
SMG1-202ENST00000446231 F8P00451 2351 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 H0Y8X5 98 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 GCHFRP30047 84 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 OR1L4Q8NGR5 311 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 OR1N1Q8NGS0 311 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 ANKRD36A6QL64 1941 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 DEFB115Q30KQ5 88 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 PIEZO2Q9H5I5 2752 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 Q1RN00 199 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 PQLC2Q6ZP29 291 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 ITGB1BP1O14713 200 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 S1PR2O95136 353 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 FOLR3P41439 243 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 TSPAN7P41732 249 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 UBE2L3P68036 154 aaKnown RBP6.81□□□□□ -1.32
SMG1-202ENST00000446231 PRDX4Q13162 271 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 KCNS1Q96KK3 526 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 OR6C1Q96RD1 312 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 VOPP1Q96AW1 172 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 PGLYRP4Q96LB8 373 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 TRAV38-1A0A0B4J264 116 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 ZBTB34Q8NCN2 500 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 CDX2Q99626 313 aaPredicted RBP6.81□□□□□ -1.32
SMG1-202ENST00000446231 DEFA4P12838 97 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 GCSHP23434 173 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 CCR5P51681 352 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 MIC13Q5XKP0 118 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 HES4Q9HCC6 221 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 SPCS1Q9Y6A9 102 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 TRAV9-1A0A075B6T8 112 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 TNFSF11O14788 317 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 SCTP09683 121 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 TCF23Q7RTU1 214 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 RPL36A-HNRNPH2H7BZ11 118 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 GNG3P63215 75 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 HYAL1Q12794 435 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 PDPNQ86YL7 162 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 LY75O60449 1722 aa6.81□□□□□ -1.32
SMG1-202ENST00000446231 G6PCP35575 357 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 CPEB3Q8NE35 698 aaKnown RBP6.8□□□□□ -1.32
SMG1-202ENST00000446231 COMMD5Q9GZQ3 224 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 SLC17A3O00476 420 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 ABHD17BQ5VST6 288 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 KCNE4Q8WWG9 221 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 ASPHD2Q6ICH7 369 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 COX11Q9Y6N1 276 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 IGHV3-15A0A0B4J1V0 119 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 RBM11P57052 281 aaKnown RBP6.8□□□□□ -1.32
SMG1-202ENST00000446231 TAAR3PQ9P1P4 343 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 SCN7AQ01118 1682 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 LINC00596Q86U02 117 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 TMEM116Q8NCL8 245 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 PATE1Q8WXA2 126 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 ALKBH3Q96Q83 286 aaPredicted RBP6.8□□□□□ -1.32
SMG1-202ENST00000446231 JKAMPQ9P055 326 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 IL36RNQ9UBH0 155 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 CCL5P13501 91 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 FNDC4Q9H6D8 234 aaPredicted RBP6.8□□□□□ -1.32
SMG1-202ENST00000446231 ZNF217O75362 1048 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 TMEM256Q8N2U0 113 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 OR4S2Q8NH73 311 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 ITGB4P16144 1822 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 SPATA46Q5T0L3 261 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 PRDM13Q9H4Q3 707 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 SELENOTP62341 195 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.8□□□□□ -1.32
SMG1-202ENST00000446231 PPIHO43447 177 aaKnown RBP6.8□□□□□ -1.32
SMG1-202ENST00000446231 OR4P4Q8NGL7 312 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 CA11O75493 328 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 CDPF1Q6NVV7 123 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 OR10X1Q8NGY0 326 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 HIF1ANQ9NWT6 349 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 RNF186Q9NXI6 227 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 DUSP13Q9UII6 198 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 MRPS16Q9Y3D3 137 aaKnown RBP6.8□□□□□ -1.32
SMG1-202ENST00000446231 SLC25A5P05141 298 aaKnown RBP6.8□□□□□ -1.32
SMG1-202ENST00000446231 F2RP25116 425 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 IL3RAP26951 378 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 RPS19BP1Q86WX3 136 aaKnown RBP6.8□□□□□ -1.32
SMG1-202ENST00000446231 OR2V2Q96R30 315 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 GREB1Q4ZG55 1949 aa6.8□□□□□ -1.32
SMG1-202ENST00000446231 SOX8P57073 446 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 C16orf47Q6ZP98 133 aaPredicted RBP6.79□□□□□ -1.32
SMG1-202ENST00000446231 LDLRAD4O15165 306 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 GDF9O60383 454 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 AGMATQ9BSE5 352 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 MRPS21P82921 87 aaKnown RBP6.79□□□□□ -1.32
SMG1-202ENST00000446231 TMEM164Q5U3C3 297 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 OR1B1Q8NGR6 318 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 ZPBPQ9BS86 351 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 TBC1D28Q2M2D7 210 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 LHFPL6Q9Y693 200 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 CNEP1R1Q8N9A8 125 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 NAT6Q93015 286 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 LSM10Q969L4 123 aaKnown RBP6.79□□□□□ -1.32
SMG1-202ENST00000446231 IL23AQ9NPF7 189 aa6.79□□□□□ -1.32
SMG1-202ENST00000446231 RPL23P62829 140 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms