RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ZFAND2BQ8WV99 257 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 AGMATQ9BSE5 352 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 FXYD6Q9H0Q3 95 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 ESM1Q9NQ30 184 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 MINOS1-NBL1R4GNA1 71 aa13.91□□□□□ -0.18
LIME1-202ENST00000444951 OR5H14A6NHG9 310 aa13.9□□□□□ -0.18
LIME1-202ENST00000444951 ITGB1BP1O14713 200 aa13.9□□□□□ -0.18
LIME1-202ENST00000444951 RAB29O14966 203 aa13.9□□□□□ -0.18
LIME1-202ENST00000444951 PGAM2P15259 253 aa13.9□□□□□ -0.18
LIME1-202ENST00000444951 BPIFB3P59826 476 aa13.9□□□□□ -0.18
LIME1-202ENST00000444951 C16orf87Q6PH81 154 aa13.9□□□□□ -0.18
LIME1-202ENST00000444951 MOB3AQ96BX8 217 aa13.9□□□□□ -0.18
LIME1-202ENST00000444951 AJUBAQ96IF1 538 aa13.9□□□□□ -0.18
LIME1-202ENST00000444951 S1PR3Q99500 378 aa13.9□□□□□ -0.18
LIME1-202ENST00000444951 CCL28Q9NRJ3 127 aa13.9□□□□□ -0.18
LIME1-202ENST00000444951 PIPOXQ9P0Z9 390 aa13.9□□□□□ -0.18
LIME1-202ENST00000444951 CENPXA8MT69 81 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 LY6LH3BQJ8 138 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 M0R1X1 148 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 GAPDHP04406 335 aaKnown RBP13.89□□□□□ -0.19
LIME1-202ENST00000444951 IFITM3Q01628 133 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 BAMBIQ13145 260 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 IDO2Q6ZQW0 420 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 MOB3BQ86TA1 216 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 TGIF2LXQ8IUE1 241 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 DRAXINQ8NBI3 349 aaPredicted RBP13.89□□□□□ -0.19
LIME1-202ENST00000444951 TERB2Q8NHR7 220 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 ZDHHC16Q969W1 377 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 MALSU1Q96EH3 234 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 PRRT1Q99946 306 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 SDHAF2Q9NX18 166 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 SCP2D1Q9UJQ7 156 aa13.89□□□□□ -0.19
LIME1-202ENST00000444951 TMEM89A2RUT3 159 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 PLA2G10O15496 165 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 TNFSF12O43508 249 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 FBP1P09467 338 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 COMPP49747 757 aaPredicted RBP13.88□□□□□ -0.19
LIME1-202ENST00000444951 CCR6P51684 374 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 AADACL3Q5VUY0 350 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 DRAM1Q8N682 238 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 ZNF645Q8N7E2 425 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 ZDHHC22Q8N966 263 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 MARCH1Q8TCQ1 289 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 FAM216AQ8WUB2 273 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 RTN4IP1Q8WWV3 396 aaPredicted RBP13.88□□□□□ -0.19
LIME1-202ENST00000444951 BORCS5Q969J3 196 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 RBMXL1Q96E39 390 aaKnown RBP13.88□□□□□ -0.19
LIME1-202ENST00000444951 C5orf30Q96GV9 206 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 GPHA2Q96T91 129 aa13.88□□□□□ -0.19
LIME1-202ENST00000444951 MRPL20Q9BYC9 149 aaKnown RBP13.88□□□□□ -0.19
LIME1-202ENST00000444951 MGAM2Q2M2H8 2515 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 IGHV3-72A0A0B4J1Y9 119 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 LYRM1O43325 122 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 PI3P19957 117 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 CD24P25063 80 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 RAB13P51153 203 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 LINC00205P59089 165 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 SCGB2A2Q13296 93 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 GLDNQ6ZMI3 551 aaPredicted RBP13.87□□□□□ -0.19
LIME1-202ENST00000444951 ZNF818PQ6ZRF7 136 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 ZNF833PQ6ZTB9 187 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 C9orf139Q6ZV77 190 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 LHFPL1Q86WI0 220 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 SIGLECL1Q8N7X8 197 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 ST6GALNAC6Q969X2 333 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 ZNF48Q96MX3 618 aaPredicted RBP13.87□□□□□ -0.19
LIME1-202ENST00000444951 ZNF251Q9BRH9 671 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 TNFRSF19Q9NS68 423 aa13.87□□□□□ -0.19
LIME1-202ENST00000444951 IGHV1-3A0A0C4DH29 117 aa13.86□□□□□ -0.19
LIME1-202ENST00000444951 NAP1L6A6NFF2 107 aa13.86□□□□□ -0.19
LIME1-202ENST00000444951 TIMM23O14925 209 aa13.86□□□□□ -0.19
LIME1-202ENST00000444951 ZNF137PP52743 207 aa13.86□□□□□ -0.19
LIME1-202ENST00000444951 PHLDA2Q53GA4 152 aa13.86□□□□□ -0.19
LIME1-202ENST00000444951 CCDC144NLQ6NUI1 221 aa13.86□□□□□ -0.19
LIME1-202ENST00000444951 OR13C8Q8NGS7 320 aa13.86□□□□□ -0.19
LIME1-202ENST00000444951 C7orf50Q9BRJ6 194 aaKnown RBP13.86□□□□□ -0.19
LIME1-202ENST00000444951 GHITMQ9H3K2 345 aa13.86□□□□□ -0.19
LIME1-202ENST00000444951 TBC1D24Q9ULP9 559 aa13.86□□□□□ -0.19
LIME1-202ENST00000444951 A0A1W2PPI3 338 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 TRIM77I1YAP6 450 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 PROP1O75360 226 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 SLC22A5O76082 557 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 IGLV2-14P01704 120 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 GNRHRP30968 328 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 ARHGDIBP52566 201 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 ZNF816Q0VGE8 651 aaPredicted RBP13.85□□□□□ -0.19
LIME1-202ENST00000444951 ABCA11PQ4W5N1 156 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 LPCAT3Q6P1A2 487 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 RBMS3Q6XE24 437 aaKnown RBP13.85□□□□□ -0.19
LIME1-202ENST00000444951 SLC38A6Q8IZM9 456 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.85□□□□□ -0.19
LIME1-202ENST00000444951 DEDD2Q8WXF8 326 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 MRGPRFQ96AM1 343 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 SSX3Q99909 188 aa13.85□□□□□ -0.19
LIME1-202ENST00000444951 OOSP1A8MZH6 123 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 GPR31O00270 319 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 TXNL1O43396 289 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 CT45A6P0DMU7 189 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 CT45A5P0DMU8 189 aa13.84□□□□□ -0.19
LIME1-202ENST00000444951 CT45A7P0DMV0 189 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms