RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CXorf1O96002 111 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 CLPSP04118 112 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 AMY1AP04745 511 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 PSG2P11465 335 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 UCP1P25874 307 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 BMI1P35226 326 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 A0A1W2PNR3 127 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 ZNF17P17021 662 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 TGFBR3Q03167 851 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 TRIB1Q96RU8 372 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 HIPK2Q9H2X6 1198 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 ST20Q9HBF5 79 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 SLC25A34Q6PIV7 304 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 ZNF808Q8N4W9 903 aaPredicted RBP4.3□□□□□ -1.72
HERC1-201ENST00000443617 KCNS1Q96KK3 526 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 DECR2Q9NUI1 292 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 HS3ST3A1Q9Y663 406 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 M0R2Z0 102 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 USF1P22415 310 aaPredicted RBP4.3□□□□□ -1.72
HERC1-201ENST00000443617 PLPPR1Q8TBJ4 325 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.3□□□□□ -1.72
HERC1-201ENST00000443617 LIME1Q9H400 295 aa4.3□□□□□ -1.72
HERC1-201ENST00000443617 HELTA6NFD8 242 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 IGLC2P0DOY2 106 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 IGLC3P0DOY3 106 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 DRD3P35462 400 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 AMMECR1LQ6DCA0 310 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 LMX1AQ8TE12 382 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 C11orf1Q9H5F2 150 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 ZNF581Q9P0T4 197 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 TMEM265A0A087WTH1 108 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 TMEM238C9JI98 176 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 IL11P20809 199 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 C1orf61Q13536 156 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 PLXNB2O15031 1838 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 WNK1Q9H4A3 2382 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 A6NDN8 102 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 C1QTNF9P0C862 333 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 IL36GQ9NZH8 169 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 ZNF391Q9UJN7 358 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 FBXL7Q9UJT9 491 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 PSG1P11464 419 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 SRIP30626 198 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 NTSR1P30989 418 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 SELENOVP59797 346 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 Q0VG73 95 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 CDCP2Q5VXM1 449 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 MOB1BQ7L9L4 216 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 KCNE4Q8WWG9 221 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 ZNF324O75467 553 aaPredicted RBP4.29□□□□□ -1.72
HERC1-201ENST00000443617 RBM11P57052 281 aaKnown RBP4.29□□□□□ -1.72
HERC1-201ENST00000443617 OR8I2Q8N0Y5 310 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 DEFB118Q96PH6 123 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 MRPL54Q6P161 138 aaKnown RBP4.29□□□□□ -1.72
HERC1-201ENST00000443617 DEFB126Q9BYW3 111 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 ULBP2Q9BZM5 246 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 OR2H1Q9GZK4 316 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 CST9LQ9H4G1 147 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 OR5B21A6NL26 309 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 GJE1A6NN92 205 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 YPEL1O60688 119 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 PIAS2O75928 621 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 ZFAND5O76080 213 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 CDC34P49427 236 aaPredicted RBP4.29□□□□□ -1.72
HERC1-201ENST00000443617 YPEL2Q96QA6 119 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 DHHO43323 396 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 ZNF841Q6ZN19 808 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 IGKV1D-13A0A0B4J2D9 117 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 PRR19A6NJB7 356 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 IGKV1-13P0DP09 117 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 ESDP10768 282 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 FKBP2P26885 142 aaKnown RBP4.29□□□□□ -1.72
HERC1-201ENST00000443617 FAM19A2Q8N3H0 131 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 RPP25LQ8N5L8 163 aaKnown RBP4.29□□□□□ -1.72
HERC1-201ENST00000443617 CSTL1Q9H114 145 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 SH2D2AQ9NP31 389 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 CD207Q9UJ71 328 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 DYSFO75923 2080 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 ZNF891A8MT65 544 aaPredicted RBP4.29□□□□□ -1.72
HERC1-201ENST00000443617 TNFSF11O14788 317 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 VAMP5O95183 116 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 NAPSAO96009 420 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 MT-ND6P03923 174 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 BCL3P20749 454 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 ERVK-16P61578 105 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 DCAF12Q5T6F0 453 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 LRFN3Q9BTN0 628 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 TIMM8BQ9Y5J9 83 aaPredicted RBP4.29□□□□□ -1.72
HERC1-201ENST00000443617 EML5Q05BV3 1969 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 IGKV3-11P04433 115 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 ZNF83P51522 516 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 DEFB103AP81534 67 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 KIAA1644Q3SXP7 199 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 SEPSECSQ9HD40 501 aaKnown RBP4.29□□□□□ -1.72
HERC1-201ENST00000443617 IL36BQ9NZH7 164 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 HAND1O96004 215 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 CAPZBP47756 277 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 MRPL21Q7Z2W9 205 aaKnown RBP4.29□□□□□ -1.72
HERC1-201ENST00000443617 TRAPPC2LQ9UL33 140 aa4.29□□□□□ -1.72
HERC1-201ENST00000443617 ZNF726P1Q15940 193 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms