RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 GLIPR2Q9H4G4 154 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 ING1Q9UK53 422 aaPredicted RBP8.8□□□□□ -1
SYNE2-206ENST00000441438 ZNF106Q9H2Y7 1883 aaKnown RBP8.8□□□□□ -1
SYNE2-206ENST00000441438 LOC285095A0A1B0GVY8 99 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 ZNF850A8MQ14 1090 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 FAM157AC9JC47 383 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 FAM106CPP0CH98 169 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 UNC119Q13432 240 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 FAM106AQ4KMX7 169 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 EIF5AL1Q6IS14 154 aaKnown RBP8.8□□□□□ -1
SYNE2-206ENST00000441438 OR51A4Q8NGJ6 313 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 GMPPAQ96IJ6 420 aaPredicted RBP8.8□□□□□ -1
SYNE2-206ENST00000441438 AGMATQ9BSE5 352 aa8.8□□□□□ -1
SYNE2-206ENST00000441438 CT45A10P0DMU9 189 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 GGNBP1Q5YKI7 109 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 OLFML2AQ68BL7 652 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 TMUB2Q71RG4 321 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.79□□□□□ -1
SYNE2-206ENST00000441438 SCML2Q9UQR0 700 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 ZNF705GA8MUZ8 300 aaPredicted RBP8.79□□□□□ -1
SYNE2-206ENST00000441438 ZNF732B4DXR9 585 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 MYL12BO14950 172 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 SOD3P08294 240 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 AKAIN1P0CW23 69 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 DHRS2Q13268 280 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 LGALSLQ3ZCW2 172 aaPredicted RBP8.79□□□□□ -1
SYNE2-206ENST00000441438 IGFL2Q6UWQ7 119 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 GOLT1AQ6ZVE7 132 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 ZNF502Q8TBZ5 544 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 TSPAN32Q96QS1 320 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 AAMDCQ9H7C9 122 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 CA10Q9NS85 328 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 ACER3Q9NUN7 267 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 PSPNO60542 156 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 PTHP01270 115 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 TTRP02766 147 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 LINC00694P0DN24 101 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 PIPP12273 146 aaPredicted RBP8.79□□□□□ -1
SYNE2-206ENST00000441438 LHX2P50458 406 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 ZNF83P51522 516 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 DLX1P56177 255 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 HRCT1Q6UXD1 115 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 PBDC1Q9BVG4 233 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 SLC25A31Q9H0C2 315 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 TMEM222Q9H0R3 208 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 ELL3Q9HB65 397 aaPredicted RBP8.79□□□□□ -1
SYNE2-206ENST00000441438 ZNF586Q9NXT0 402 aa8.79□□□□□ -1
SYNE2-206ENST00000441438 NINQ8N4C6 2090 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 CDRT1O95170 752 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 HKR1P10072 659 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 POLR2HP52434 150 aaKnown RBP8.78□□□□□ -1
SYNE2-206ENST00000441438 IZUMO4Q1ZYL8 232 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 Q6ZVH6 145 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 LRRTM1Q86UE6 522 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 ERMAPQ96PL5 475 aaPredicted RBP8.78□□□□□ -1
SYNE2-206ENST00000441438 HIST1H2BLQ99880 126 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 SH3BGRL3Q9H299 93 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 REEP1Q9H902 201 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 NUDT4Q9NZJ9 180 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 MPPED1O15442 326 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 GLCCI1Q86VQ1 547 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 CIB3Q96Q77 187 aaPredicted RBP8.78□□□□□ -1
SYNE2-206ENST00000441438 OR4K3Q96R72 315 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 DPY30Q9C005 99 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 SERTAD4Q9NUC0 356 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 ZNF226Q9NYT6 803 aa8.78□□□□□ -1
SYNE2-206ENST00000441438 KMT2EQ8IZD2 1858 aa8.77□□□□□ -1
SYNE2-206ENST00000441438 A0A1B0GTH9 108 aa8.77□□□□□ -1
SYNE2-206ENST00000441438 ZNF670-ZNF695F2Z2N8 137 aa8.77□□□□□ -1
SYNE2-206ENST00000441438 K7EQS6 105 aa8.77□□□□□ -1
SYNE2-206ENST00000441438 PLAUP00749 431 aa8.77□□□□□ -1
SYNE2-206ENST00000441438 MEF2DQ14814 521 aa8.77□□□□□ -1
SYNE2-206ENST00000441438 TCEAL5Q5H9L2 206 aa8.77□□□□□ -1
SYNE2-206ENST00000441438 PPP1R27Q86WC6 154 aa8.77□□□□□ -1
SYNE2-206ENST00000441438 NEIL3Q8TAT5 605 aa8.77□□□□□ -1
SYNE2-206ENST00000441438 PRTFDC1Q9NRG1 225 aa8.77□□□□□ -1
SYNE2-206ENST00000441438 VDAC3Q9Y277 283 aa8.77□□□□□ -1
SYNE2-206ENST00000441438 CHD3Q12873 2000 aaKnown RBP8.77□□□□□ -1.01
SYNE2-206ENST00000441438 A0A0D9SG52 128 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 TMEM178BH3BS89 294 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 NHLRC4P0CG21 123 aaPredicted RBP8.77□□□□□ -1.01
SYNE2-206ENST00000441438 ATF1P18846 271 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 SPANXN4Q5MJ08 99 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 LCN10Q6JVE6 187 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 EXOC3-AS1Q8N2X6 119 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 OR5A1Q8NGJ0 315 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 RTBDNQ9BSG5 229 aaPredicted RBP8.77□□□□□ -1.01
SYNE2-206ENST00000441438 WDR87Q6ZQQ6 2873 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 PLA2G10O15496 165 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 ZNF354AO60765 605 aaPredicted RBP8.77□□□□□ -1.01
SYNE2-206ENST00000441438 GKN3PP0CG01 181 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 GYPEP15421 78 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 CXCL3P19876 107 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 ST3GAL2Q16842 350 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 SLC22A18ASQ8N1D0 253 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 WFDC5Q8TCV5 224 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 MARCH5Q9NX47 278 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 ENPP4Q9Y6X5 453 aa8.77□□□□□ -1.01
SYNE2-206ENST00000441438 CKAP5Q14008 2032 aa8.76□□□□□ -1.01
SYNE2-206ENST00000441438 TRAF3IP2O43734 574 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms