RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 NCBP2P52298 156 aaKnown RBP eCLIP2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 NDUFV3P56181 108 aaKnown RBP2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 TAS2R30P59541 319 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 DEFA3P59666 94 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 KRTAP10-12P60413 245 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 FKBP3Q00688 224 aaKnown RBP2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 PSG9Q00887 426 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 ERCC8Q13216 396 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 HTR4Q13639 388 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 ENDOGQ14249 297 aaKnown RBP2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 C16orf72Q14CZ0 275 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF146Q15072 292 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 SIX1Q15475 284 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 TIMM50Q3ZCQ8 353 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 FBXL19-AS1Q494R0 122 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF404Q494X3 552 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 FBXW12Q6X9E4 464 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 IL34Q6ZMJ4 242 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 ACP7Q6ZNF0 438 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 ATP5L2Q7Z4Y8 100 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 PRNTQ86SH4 94 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 TRPT1Q86TN4 253 aaKnown RBP2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 LINC01551Q86U37 167 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 PDZD9Q8IXQ8 264 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 LYG1Q8N1E2 194 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 C12orf45Q8N5I9 185 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR5W2Q8NH69 310 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR5K1Q8NHB7 308 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 SLC7A6Q92536 515 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 ARL11Q969Q4 196 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM159Q96B96 161 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 NEURL3Q96EH8 262 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 KLF6Q99612 283 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 LXNQ9BS40 222 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM70Q9BUB7 260 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 PDCD10Q9BUL8 212 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 SMIM3Q9BZL3 60 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 PBOV1Q9GZY1 135 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 VCXQ9H320 206 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 SLCO1B3Q9NPD5 702 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 MED11Q9P086 117 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 RPS6KB2Q9UBS0 482 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 SLC25A15Q9Y619 301 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 PXMP4Q9Y6I8 212 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZCCHC11Q5TAX3 1644 aaKnown RBP2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 NOS1P29475 1434 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 PDS5BQ9NTI5 1447 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 RTL1A6NKG5 1358 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 WDR81Q562E7 1941 aa2.74□□□□□ -1.97
HMGB1P12-201ENST00000438594 FER1L5A0AVI2 2057 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMEM131Q92545 1883 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 NFASCO94856 1347 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 GAPVD1Q14C86 1478 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 CCDC18Q5T9S5 1454 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 MAGI1Q96QZ7 1491 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 IFT140Q96RY7 1462 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 YLPM1P49750 1951 aaKnown RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 hCG_1818297A0A087WSY0 165 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 TRAV9-2A0A087WT02 112 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 TMED7-TICAM2A0A0A6YYA0 188 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 A0A1B0GW64 132 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 DUXBA0A1W2PPF3 345 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 C20orf202A1L168 122 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 A8MT66 165 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 C9JAW5 83 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 K7EPK0 472 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 AIPO00170 330 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 IGHV3-43DP0DP04 118 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF30P17039 623 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 EVI2AP22794 236 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 CMPK1P30085 196 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 POLR2IP36954 125 aaKnown RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 EIF2B2P49770 351 aaKnown RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 P2RX1P51575 399 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 TDGF1P3P51864 188 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 PKIAP61925 76 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 MRPS10P82664 201 aaKnown RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 LOXL1Q08397 574 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 LY6DQ14210 128 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 RHEBQ15382 184 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 MRGPRG-AS1Q2M3A8 158 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 ABCA11PQ4W5N1 156 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 CLLU1OSQ5K130 101 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 PRSS54Q6PEW0 395 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 HRCT1Q6UXD1 115 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 RNF165Q6ZSG1 346 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 TCF23Q7RTU1 214 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 ZNF589Q86UQ0 364 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 RFLNBQ8N5W9 214 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 RXFP4Q8TDU9 374 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 MALSU1Q96EH3 234 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 ADAT3Q96EY9 351 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 ATXN7L3BQ96GX2 97 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 KCNS1Q96KK3 526 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 SFXN3Q9BWM7 321 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 CLEC7AQ9BXN2 247 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR2H1Q9GZK4 316 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 OR2D2Q9H210 308 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 PARLQ9H300 379 aa2.73□□□□□ -1.97
HMGB1P12-201ENST00000438594 CDC42EP4Q9H3Q1 356 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms