RNA–Protein interactions for RNA: ENST00000437607.1

PTPRF-208, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-208ENST00000437607 GNG10P50151 68 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 RAB7AP51149 207 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 DLX6P56179 175 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 ZNF660Q6AZW8 331 aaPredicted RBP9.85□□□□□ -0.83
PTPRF-208ENST00000437607 CCBE1Q6UXH8 406 aaPredicted RBP9.85□□□□□ -0.83
PTPRF-208ENST00000437607 SLC38A6Q8IZM9 456 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 OR13C8Q8NGS7 320 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 MARCH1Q8TCQ1 289 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 YPEL2Q96QA6 119 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 ABHD14AQ9BUJ0 271 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 SLC5A7Q9GZV3 580 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 SIRPDQ9H106 197 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 MMP28Q9H239 520 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 KPTNQ9Y664 436 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 POMT1Q9Y6A1 747 aa9.85□□□□□ -0.83
PTPRF-208ENST00000437607 DSCAML1Q8TD84 2053 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 TRAV6A0A075B6T7 132 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 GPR137BO60478 399 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 MMP23AO75900 390 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 TOX4O94842 621 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 IGHV4-59P01825 116 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 H2AFB2P0C5Z0 115 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 SPNP16150 400 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 LOXL3P58215 753 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 PROK1P58294 105 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 TAS2R31P59538 309 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 Q3ZCU0 254 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 ABCA11PQ4W5N1 156 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 AADACL3Q5VUY0 350 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 LPCAT3Q6P1A2 487 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 DHRS11Q6UWP2 260 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 TMED4Q7Z7H5 227 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 DUSP18Q8NEJ0 188 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 LINC01006Q8NI28 216 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 ZFAND1Q8TCF1 268 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 TOLLIPQ9H0E2 274 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 PARP12Q9H0J9 701 aaKnown RBP9.84□□□□□ -0.83
PTPRF-208ENST00000437607 OR2D2Q9H210 308 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 TMEM133Q9H2Q1 129 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 METTL8Q9H825 291 aaKnown RBP9.84□□□□□ -0.83
PTPRF-208ENST00000437607 PSG11Q9UQ72 335 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 RNF114Q9Y508 228 aa9.84□□□□□ -0.83
PTPRF-208ENST00000437607 IGKV1D-13A0A0B4J2D9 117 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 IGHV1-69DA0A0B4J2H0 117 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 A0A0U1RQK1 487 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 INMT-MINDY4F8WBC2 141 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 M0QZ24 198 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 ST8SIA5O15466 376 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 PEX14O75381 377 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 TSPAN15O95858 294 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 IGHV1-69P01742 117 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 CTSDP07339 412 aaPredicted RBP9.83□□□□□ -0.84
PTPRF-208ENST00000437607 OR8U9P0C7N5 309 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 IGKV1-13P0DP09 117 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 COX7A1P24310 79 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 IER3P46695 156 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 UCP3P55916 312 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 RPL15P61313 204 aaKnown RBP9.83□□□□□ -0.84
PTPRF-208ENST00000437607 ARF6P62330 175 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 MORN2Q502X0 79 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 LDLRAD3Q86YD5 345 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 CCDC71LQ8N9Z2 235 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 OR13D1Q8NGV5 346 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 OR8U1Q8NH10 309 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 SSMEM1Q8WWF3 244 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 LEAP2Q969E1 77 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 ZNF486Q96H40 463 aaPredicted RBP9.83□□□□□ -0.84
PTPRF-208ENST00000437607 SIRT7Q9NRC8 400 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 VSIG4Q9Y279 399 aa9.83□□□□□ -0.84
PTPRF-208ENST00000437607 IGHV2-26A0A0B4J1V2 119 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 GPR31O00270 319 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 ITGB1BP1O14713 200 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 HSD17B6O14756 317 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 TIMM23O14925 209 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 SLC22A5O76082 557 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 DHFRP00374 187 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 IGHV3-7P01780 117 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 IL3RAP26951 378 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 CD34P28906 385 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 GPR12P47775 334 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 RAB25P57735 213 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 LY6G6FQ5SQ64 297 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 NCR3LG1Q68D85 454 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 FAM53AQ6NSI3 398 aaPredicted RBP9.82□□□□□ -0.84
PTPRF-208ENST00000437607 C11orf88Q6PI97 169 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 VMO1Q7Z5L0 202 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 C1QL4Q86Z23 238 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 CMTM1Q8IZ96 169 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 PIP4P2Q8N4L2 257 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 ZNF645Q8N7E2 425 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 OR10X1Q8NGY0 326 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 OR9G1Q8NH87 305 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 LHX4Q969G2 390 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 MRGPRFQ96AM1 343 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 CLEC7AQ9BXN2 247 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 HEXA-AS1Q9H8Q6 139 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 ZNF221Q9UK13 617 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 FLVCR2Q9UPI3 526 aa9.82□□□□□ -0.84
PTPRF-208ENST00000437607 AMMECR1Q9Y4X0 333 aaPredicted RBP9.82□□□□□ -0.84
PTPRF-208ENST00000437607 COL7A1Q02388 2944 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms