RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ZNRD1Q9P1U0 126 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 PROP1O75360 226 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 HCP5Q6MZN7 132 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 MSI2Q96DH6 328 aaKnown RBP18.74■□□□□ 0.59
CPSF4-204ENST00000436336 GPHA2Q96T91 129 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 S1PR3Q99500 378 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 ZNF251Q9BRH9 671 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 HIF1ANQ9NWT6 349 aa18.74■□□□□ 0.59
CPSF4-204ENST00000436336 CSMD1Q96PZ7 3565 aa18.73■□□□□ 0.59
CPSF4-204ENST00000436336 RNF212BA8MTL3 300 aa18.73■□□□□ 0.59
CPSF4-204ENST00000436336 IGHV4-31P0DP07 118 aa18.73■□□□□ 0.59
CPSF4-204ENST00000436336 ANXA3P12429 323 aa18.73■□□□□ 0.59
CPSF4-204ENST00000436336 HOXB4P17483 251 aaPredicted RBP18.73■□□□□ 0.59
CPSF4-204ENST00000436336 IL3RAP26951 378 aa18.73■□□□□ 0.59
CPSF4-204ENST00000436336 ZNF137PP52743 207 aa18.73■□□□□ 0.59
CPSF4-204ENST00000436336 RPL39P5Q59GN2 51 aa18.73■□□□□ 0.59
CPSF4-204ENST00000436336 ZNF66Q6ZN08 573 aa18.73■□□□□ 0.59
CPSF4-204ENST00000436336 HSD17B10Q99714 261 aaKnown RBP18.73■□□□□ 0.59
CPSF4-204ENST00000436336 OR51J1Q9H342 316 aa18.73■□□□□ 0.59
CPSF4-204ENST00000436336 C3orf85A0A1B0GTC6 90 aa18.72■□□□□ 0.59
CPSF4-204ENST00000436336 RNASEK-C17orf49H0YIS7 233 aa18.72■□□□□ 0.59
CPSF4-204ENST00000436336 DUS4LO95620 317 aaKnown RBP18.72■□□□□ 0.59
CPSF4-204ENST00000436336 F2RP25116 425 aa18.72■□□□□ 0.59
CPSF4-204ENST00000436336 KLRD1Q13241 179 aa18.72■□□□□ 0.59
CPSF4-204ENST00000436336 FAM71F2Q6NXP2 309 aa18.72■□□□□ 0.59
CPSF4-204ENST00000436336 ZNF833PQ6ZTB9 187 aa18.72■□□□□ 0.59
CPSF4-204ENST00000436336 AMMECR1Q9Y4X0 333 aaPredicted RBP18.72■□□□□ 0.59
CPSF4-204ENST00000436336 MAP1AP78559 2803 aaPredicted RBP18.72■□□□□ 0.59
CPSF4-204ENST00000436336 IFNA2P01563 188 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 CATR1Q13166 79 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 SLC9A3R2Q15599 337 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 C1orf229Q6ZS94 237 aaPredicted RBP18.71■□□□□ 0.59
CPSF4-204ENST00000436336 OR4P4Q8NGL7 312 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 CASTOR1Q8WTX7 329 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 ODF3BA8MYP8 253 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 M0R1X1 148 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 B3GALNT1O75752 331 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 ARG1P05089 322 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 OR5AC1P0C628 307 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 DUTP33316 252 aaKnown RBP18.71■□□□□ 0.59
CPSF4-204ENST00000436336 CADM3Q8N126 398 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 OR51H1Q8NH63 302 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 MITD1Q8WV92 249 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 ST6GALNAC6Q969X2 333 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 LIN7CQ9NUP9 197 aaKnown RBP18.71■□□□□ 0.59
CPSF4-204ENST00000436336 AUP1Q9Y679 476 aa18.71■□□□□ 0.59
CPSF4-204ENST00000436336 H0Y980 276 aa18.7■□□□□ 0.58
CPSF4-204ENST00000436336 BUB1B-PAK6H3BSN5 160 aa18.7■□□□□ 0.58
CPSF4-204ENST00000436336 TGFAP01135 160 aa18.7■□□□□ 0.58
CPSF4-204ENST00000436336 C12orf45Q8N5I9 185 aaPredicted RBP18.7■□□□□ 0.58
CPSF4-204ENST00000436336 LHX4Q969G2 390 aa18.7■□□□□ 0.58
CPSF4-204ENST00000436336 TP53RKQ96S44 253 aa18.7■□□□□ 0.58
CPSF4-204ENST00000436336 PHB2Q99623 299 aa18.7■□□□□ 0.58
CPSF4-204ENST00000436336 C7orf69Q9H7B7 122 aa18.7■□□□□ 0.58
CPSF4-204ENST00000436336 SSNA1O43805 119 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 BCAP31P51572 246 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 UBE2E1P51965 193 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 RPL30P62888 115 aaKnown RBP18.69■□□□□ 0.58
CPSF4-204ENST00000436336 SP6Q3SY56 376 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 ITGB1BP2Q9UKP3 347 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 A0A0B4J2A0 478 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 LINC00473A8K010 186 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 J3QLI3 93 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 TMEM187Q14656 261 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 CYB5R2Q6BCY4 276 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 TCTEX1D1Q8N7M0 179 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 COQ8AQ8NI60 647 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 GLYATL2Q8WU03 294 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 TCTEX1D2Q8WW35 142 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 ADTRPQ96IZ2 230 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 SHPKQ9UHJ6 478 aa18.69■□□□□ 0.58
CPSF4-204ENST00000436336 CCDC168Q8NDH2 2452 aa18.68■□□□□ 0.58
CPSF4-204ENST00000436336 ZNF16P17020 682 aaPredicted RBP18.68■□□□□ 0.58
CPSF4-204ENST00000436336 HTR1DP28221 377 aa18.68■□□□□ 0.58
CPSF4-204ENST00000436336 THBS3P49746 956 aa18.68■□□□□ 0.58
CPSF4-204ENST00000436336 RRAS2P62070 204 aaPredicted RBP18.68■□□□□ 0.58
CPSF4-204ENST00000436336 PDZD9Q8IXQ8 264 aa18.68■□□□□ 0.58
CPSF4-204ENST00000436336 CIARTQ8N365 385 aaPredicted RBP18.68■□□□□ 0.58
CPSF4-204ENST00000436336 TMEM222Q9H0R3 208 aa18.68■□□□□ 0.58
CPSF4-204ENST00000436336 MED28Q9H204 178 aa18.68■□□□□ 0.58
CPSF4-204ENST00000436336 UCP1P25874 307 aa18.67■□□□□ 0.58
CPSF4-204ENST00000436336 ANKRD55Q3KP44 614 aa18.67■□□□□ 0.58
CPSF4-204ENST00000436336 LIAT1Q6ZQX7 453 aa18.67■□□□□ 0.58
CPSF4-204ENST00000436336 DRAXINQ8NBI3 349 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-204ENST00000436336 FAM212BQ9NTI7 297 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-204ENST00000436336 ITPR3Q14573 2671 aa18.67■□□□□ 0.58
CPSF4-204ENST00000436336 LEUTXA8MZ59 168 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 LY6LH3BQJ8 138 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 SRPXP78539 464 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 TGIF2LXQ8IUE1 241 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 PRR13Q9NZ81 148 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 DPM3Q9P2X0 92 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 CENPVL3A0A0U1RRI6 287 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 CT45A6P0DMU7 189 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 CT45A5P0DMU8 189 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 CT45A7P0DMV0 189 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 CEACAM3P40198 252 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 LINC00205P59089 165 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 DIAPH2-AS1Q14236 149 aa18.66■□□□□ 0.58
CPSF4-204ENST00000436336 LRTM2Q8N967 370 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms