RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.37□□□□□ -1.87
USP54-206ENST00000433394 OR1P1Q8NH06 330 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 OR5AK3PQ8NH89 298 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 OR5P2Q8WZ92 322 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 CCL17Q92583 94 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 DDIT4LQ96D03 193 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 PGLYRP3Q96LB9 341 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 MBOAT7Q96N66 472 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 ANGPTL4Q9BY76 406 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 FAM60AQ9NP50 221 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 C19orf12Q9NSK7 152 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 MS4A12Q9NXJ0 267 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 MARCOQ9UEW3 520 aaPredicted RBP3.37□□□□□ -1.87
USP54-206ENST00000433394 NAGKQ9UJ70 344 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 ZNF706Q9Y5V0 76 aaPredicted RBP3.37□□□□□ -1.87
USP54-206ENST00000433394 SSC5DA1L4H1 1573 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 DYSFO75923 2080 aa3.37□□□□□ -1.87
USP54-206ENST00000433394 COL11A1P12107 1806 aaPredicted RBP3.36□□□□□ -1.87
USP54-206ENST00000433394 IGKV1D-17A0A075B6S4 117 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 A0A1B0GXF2 115 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 C2orf74A8MZ97 194 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 IGLL5B9A064 214 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 IGKV1-17P01599 117 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 IFNA6P05013 189 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 SERPINA6P08185 405 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 SPNP16150 400 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 M6PRP20645 277 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 PSMB6P28072 239 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 TSPOP30536 169 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 ACTR1BP42025 376 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 GNG10P50151 68 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 RPS11P62280 158 aaKnown RBP eCLIP3.36□□□□□ -1.87
USP54-206ENST00000433394 CCDC58Q4VC31 144 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 OR10J3Q5JRS4 329 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 GLYATQ6IB77 296 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 SPOPLQ6IQ16 392 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 CLEC18BQ6UXF7 455 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 OLIG3Q7RTU3 272 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 SMIM15Q7Z3B0 74 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 TAC4Q86UU9 113 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 CPNE9Q8IYJ1 553 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 OLFM3Q96PB7 478 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 POTEKPQ9BYX7 375 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 SLC22A4Q9H015 551 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 POMKQ9H5K3 350 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 TMEM38BQ9NVV0 291 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 DHCR7Q9UBM7 475 aaKnown RBP3.36□□□□□ -1.87
USP54-206ENST00000433394 STOML2Q9UJZ1 356 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 C3orf18Q9UK00 162 aa3.36□□□□□ -1.87
USP54-206ENST00000433394 ZNF236Q9UL36 1845 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 MYH9P35579 1960 aaKnown RBP3.35□□□□□ -1.87
USP54-206ENST00000433394 A0A1B0GX12 115 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 MYBPHLA2RUH7 354 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 C16orf90A8MZG2 172 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 BIRC5O15392 142 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 STX10O60499 249 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 PDCD6O75340 191 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 OR4E1P0C645 316 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 PVALBP20472 110 aaPredicted RBP3.35□□□□□ -1.87
USP54-206ENST00000433394 PRPS1L1P21108 318 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 G0S2P27469 103 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 CD79BP40259 229 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 MAGOHP61326 146 aaKnown RBP3.35□□□□□ -1.87
USP54-206ENST00000433394 ENDOGQ14249 297 aaKnown RBP3.35□□□□□ -1.87
USP54-206ENST00000433394 TMEM69Q5SWH9 247 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 KPRPQ5T749 579 aaPredicted RBP3.35□□□□□ -1.87
USP54-206ENST00000433394 TMEM215Q68D42 235 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 DPPA2Q7Z7J5 298 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 AMN1Q8IY45 258 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 OR8S1Q8NH09 359 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 ACTL9Q8TC94 416 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 LINC01587Q99440 93 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 TIPINQ9BVW5 301 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 BCL2L14Q9BZR8 327 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 OR51B6Q9H340 312 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 PARVAQ9NVD7 372 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 USE1Q9NZ43 259 aa3.35□□□□□ -1.87
USP54-206ENST00000433394 CASP8AP2Q9UKL3 1982 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 SVILO95425 2214 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 IGHV2-26A0A0B4J1V2 119 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 PVALEFA0A1B0GWK0 134 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 FUOMA2VDF0 154 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 FAM183AA6NL82 134 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 K7EM74 188 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 PHYHO14832 338 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 FFAR1O14842 300 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 UGT2B11O75310 529 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 LYPLA2O95372 231 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 GTF2F2P13984 249 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 HSD11B1P28845 292 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 TGFBR1P36897 503 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 EMP2P54851 167 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 RAB8AP61006 207 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 FMODQ06828 376 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 ZCWPW2Q504Y3 356 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 COQ5Q5HYK3 327 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 CALHM3Q86XJ0 350 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 C1orf64Q8NEQ6 169 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 CLDN23Q96B33 292 aa3.34□□□□□ -1.87
USP54-206ENST00000433394 RMND5BQ96G75 393 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms