RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 CHMP1AQ9HD42 196 aaPredicted RBP11.42□□□□□ -0.58
PRKDC-203ENST00000432581 GAR1Q9NY12 217 aaKnown RBP11.42□□□□□ -0.58
PRKDC-203ENST00000432581 DNAH1Q9P2D7 4330 aa11.42□□□□□ -0.58
PRKDC-203ENST00000432581 EFCAB10A6NFE3 127 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 H3BUA1 57 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 CA2P00918 260 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 CELP19835 753 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 RPS27AP62979 156 aaKnown RBP11.41□□□□□ -0.58
PRKDC-203ENST00000432581 PSG5Q15238 335 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 MOGAT2Q3SYC2 334 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 TTC23Q5W5X9 447 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 HAPLN4Q86UW8 402 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 KCNG3Q8TAE7 436 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 EDARADDQ8WWZ3 215 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 GGHQ92820 318 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 ABHD14BQ96IU4 210 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 CLCC1Q96S66 551 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 AGMATQ9BSE5 352 aa11.41□□□□□ -0.58
PRKDC-203ENST00000432581 RIMS4Q9H426 269 aaPredicted RBP11.41□□□□□ -0.58
PRKDC-203ENST00000432581 A0A0G2JLM5 398 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 C13orf42A0A1B0GVH6 325 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 H0Y980 276 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 MYL12BO14950 172 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 ARSBP15848 533 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 CPEP16870 476 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 ZBTB25P24278 435 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 WNT4P56705 351 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 GLT8D1Q68CQ7 371 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 POC5Q8NA72 575 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 SETD6Q8TBK2 473 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 CYGBQ8WWM9 190 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 TM2D1Q9BX74 207 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 PARP12Q9H0J9 701 aaKnown RBP11.4□□□□□ -0.58
PRKDC-203ENST00000432581 ZNF355PQ9NSJ1 428 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 MGAT4AQ9UM21 535 aa11.4□□□□□ -0.58
PRKDC-203ENST00000432581 TRBV6-6A0A0A6YYG2 114 aa11.39□□□□□ -0.59
PRKDC-203ENST00000432581 IFNA6P05013 189 aa11.39□□□□□ -0.59
PRKDC-203ENST00000432581 HTR2CP28335 458 aa11.39□□□□□ -0.59
PRKDC-203ENST00000432581 CEACAM6P40199 344 aa11.39□□□□□ -0.59
PRKDC-203ENST00000432581 RPS16P62249 146 aaKnown RBP11.39□□□□□ -0.59
PRKDC-203ENST00000432581 FXYD3Q14802 87 aa11.39□□□□□ -0.59
PRKDC-203ENST00000432581 C1orf100Q5SVJ3 147 aa11.39□□□□□ -0.59
PRKDC-203ENST00000432581 OR10K2Q6IF99 312 aa11.39□□□□□ -0.59
PRKDC-203ENST00000432581 C11orf54Q9H0W9 315 aaPredicted RBP11.39□□□□□ -0.59
PRKDC-203ENST00000432581 PLEKHJ1Q9NW61 149 aa11.39□□□□□ -0.59
PRKDC-203ENST00000432581 APOA2P02652 100 aa11.38□□□□□ -0.59
PRKDC-203ENST00000432581 IGKV1-16P04430 117 aa11.38□□□□□ -0.59
PRKDC-203ENST00000432581 KLF5Q13887 457 aaPredicted RBP11.38□□□□□ -0.59
PRKDC-203ENST00000432581 PDPNQ86YL7 162 aa11.38□□□□□ -0.59
PRKDC-203ENST00000432581 OR9G4Q8NGQ1 327 aa11.38□□□□□ -0.59
PRKDC-203ENST00000432581 GRPEL2Q8TAA5 225 aa11.38□□□□□ -0.59
PRKDC-203ENST00000432581 PHYHIPQ92561 330 aa11.38□□□□□ -0.59
PRKDC-203ENST00000432581 PTX4Q96A99 478 aa11.38□□□□□ -0.59
PRKDC-203ENST00000432581 TMEM68Q96MH6 324 aa11.38□□□□□ -0.59
PRKDC-203ENST00000432581 NICN1Q9BSH3 213 aa11.38□□□□□ -0.59
PRKDC-203ENST00000432581 ZNF221Q9UK13 617 aa11.38□□□□□ -0.59
PRKDC-203ENST00000432581 STARD9Q9P2P6 4700 aa11.38□□□□□ -0.59
PRKDC-203ENST00000432581 BPNT1O95861 308 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 HLA-DRB3P79483 266 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 UNC119Q13432 240 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 HAGHQ16775 308 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 ACSM3Q53FZ2 586 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 RBM48Q5RL73 367 aaKnown RBP11.37□□□□□ -0.59
PRKDC-203ENST00000432581 ADAMTSL5Q6ZMM2 481 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 LRRTM1Q86UE6 522 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 GTSCR1Q86UQ5 136 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 MS4A15Q8N5U1 240 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 DRAXINQ8NBI3 349 aaPredicted RBP11.37□□□□□ -0.59
PRKDC-203ENST00000432581 TUBA4BQ9H853 241 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 C8orf4Q9NR00 106 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 OR1A1Q9P1Q5 309 aa11.37□□□□□ -0.59
PRKDC-203ENST00000432581 ANKRD34BA5PLL1 514 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 TMEM14DPA8MWL7 114 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 SLC25A17O43808 307 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 CNIH1O95406 144 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 BRI3O95415 125 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 AADACP22760 399 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 QRFPP83859 136 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 TATDN3Q17R31 274 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 LCN12Q6JVE5 192 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 DHRSXQ8N5I4 330 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 NANOGP1Q8N7R0 232 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 ZNF383Q8NA42 475 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 OR5T1Q8NG75 326 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 URM1Q9BTM9 101 aaKnown RBP11.36□□□□□ -0.59
PRKDC-203ENST00000432581 SIGLEC8Q9NYZ4 499 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 PSORS1C1Q9UIG5 152 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 AK3Q9UIJ7 227 aa11.36□□□□□ -0.59
PRKDC-203ENST00000432581 EPPK1P58107 5090 aaKnown RBP11.36□□□□□ -0.59
PRKDC-203ENST00000432581 PROP1O75360 226 aa11.35□□□□□ -0.59
PRKDC-203ENST00000432581 JTBO76095 146 aa11.35□□□□□ -0.59
PRKDC-203ENST00000432581 SNRPBP14678 240 aaKnown RBP11.35□□□□□ -0.59
PRKDC-203ENST00000432581 LGALS7P47929 136 aa11.35□□□□□ -0.59
PRKDC-203ENST00000432581 SYNJ2BPP57105 145 aa11.35□□□□□ -0.59
PRKDC-203ENST00000432581 INSL4Q14641 139 aa11.35□□□□□ -0.59
PRKDC-203ENST00000432581 IL34Q6ZMJ4 242 aa11.35□□□□□ -0.59
PRKDC-203ENST00000432581 AHSA2Q719I0 299 aa11.35□□□□□ -0.59
PRKDC-203ENST00000432581 Q8N402 240 aa11.35□□□□□ -0.59
PRKDC-203ENST00000432581 PACRGLQ8N7B6 248 aa11.35□□□□□ -0.59
PRKDC-203ENST00000432581 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms