RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 DEFB103AP81534 67 aa14.38□□□□□ -0.11
RIF1-204ENST00000430328 PATE1Q8WXA2 126 aa14.38□□□□□ -0.11
RIF1-204ENST00000430328 IGKV6D-21A0A0A0MT36 114 aa14.38□□□□□ -0.11
RIF1-204ENST00000430328 XAF1Q6GPH4 301 aa14.38□□□□□ -0.11
RIF1-204ENST00000430328 DLK2Q6UY11 383 aa14.38□□□□□ -0.11
RIF1-204ENST00000430328 LINC00614P0C842 121 aa14.38□□□□□ -0.11
RIF1-204ENST00000430328 ZNF646O15015 1829 aaPredicted RBP14.38□□□□□ -0.11
RIF1-204ENST00000430328 TDGF1P13385 188 aa14.38□□□□□ -0.11
RIF1-204ENST00000430328 FCARP24071 287 aa14.38□□□□□ -0.11
RIF1-204ENST00000430328 SNRPD3P62318 126 aaKnown RBP14.38□□□□□ -0.11
RIF1-204ENST00000430328 ZDBF2Q9HCK1 2354 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 GRIFINA4D1Z8 144 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 FREM3P0C091 2139 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 SPSB4Q96A44 273 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 SCGB3A1Q96QR1 104 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 ARL14EPLP0DKL9 152 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 TINAGQ9UJW2 476 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 CCL27Q9Y4X3 112 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 SPTBN2O15020 2390 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 EML2O95834 649 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 SNRPCP09234 159 aaKnown RBP14.37□□□□□ -0.11
RIF1-204ENST00000430328 AMER3Q8N944 861 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 TRIOBPQ9H2D6 2365 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 TUBD1Q9UJT1 453 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 PLPP3O14495 311 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 CA11O75493 328 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 ZNF688P0C7X2 276 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 FAM106CPP0CH98 169 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 MS4A6AQ9H2W1 248 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 ALPK2Q86TB3 2170 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 HPRT1P00492 218 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 SSPNQ14714 243 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 SNAI3Q3KNW1 292 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 CYSLTR1Q9Y271 337 aa14.37□□□□□ -0.11
RIF1-204ENST00000430328 PCMT1P22061 227 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 FNDC4Q9H6D8 234 aaPredicted RBP14.36□□□□□ -0.11
RIF1-204ENST00000430328 A0A0A6YYD5 115 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 H0Y8X5 98 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 GAPDHP04406 335 aaKnown RBP14.36□□□□□ -0.11
RIF1-204ENST00000430328 KLK2P20151 261 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 TMEFF2Q9UIK5 374 aaPredicted RBP14.36□□□□□ -0.11
RIF1-204ENST00000430328 HOXA3O43365 443 aaPredicted RBP14.36□□□□□ -0.11
RIF1-204ENST00000430328 FIZ1Q96SL8 496 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 NDUFA3O95167 84 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 CRPP02741 224 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 ASAH2BP0C7U1 165 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 LGALS1P09382 135 aaKnown RBP14.36□□□□□ -0.11
RIF1-204ENST00000430328 OR2H1Q9GZK4 316 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 RNF7Q9UBF6 113 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 SMAD4Q13485 552 aaKnown RBP14.36□□□□□ -0.11
RIF1-204ENST00000430328 FOXQ1Q9C009 403 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 KIAA1217Q5T5P2 1943 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 CDIPTO14735 213 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 C1QTNF12Q5T7M4 302 aa14.36□□□□□ -0.11
RIF1-204ENST00000430328 FBXO46Q6PJ61 603 aaPredicted RBP14.36□□□□□ -0.11
RIF1-204ENST00000430328 CEACAM4O75871 244 aa14.35□□□□□ -0.11
RIF1-204ENST00000430328 GLIPR1P48060 266 aa14.35□□□□□ -0.11
RIF1-204ENST00000430328 NUP188Q5SRE5 1749 aa14.35□□□□□ -0.11
RIF1-204ENST00000430328 NOTCH3Q9UM47 2321 aa14.35□□□□□ -0.11
RIF1-204ENST00000430328 PF4V1P10720 104 aa14.35□□□□□ -0.11
RIF1-204ENST00000430328 KBTBD11-OT1A0A1B0GTJ5 212 aa14.35□□□□□ -0.11
RIF1-204ENST00000430328 ACSF3Q4G176 576 aaPredicted RBP14.35□□□□□ -0.11
RIF1-204ENST00000430328 RNF182Q8N6D2 247 aa14.35□□□□□ -0.11
RIF1-204ENST00000430328 MZB1Q8WU39 189 aa14.35□□□□□ -0.11
RIF1-204ENST00000430328 A8MWV9 139 aa14.35□□□□□ -0.11
RIF1-204ENST00000430328 TNFSF14O43557 240 aa14.35□□□□□ -0.11
RIF1-204ENST00000430328 MRPL20Q9BYC9 149 aaKnown RBP14.35□□□□□ -0.11
RIF1-204ENST00000430328 SLC25A10Q9UBX3 287 aaPredicted RBP14.35□□□□□ -0.11
RIF1-204ENST00000430328 NUP98P52948 1817 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 IGLV3-10A0A075B6K4 115 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 SAA1P0DJI8 122 aaPredicted RBP14.34□□□□□ -0.11
RIF1-204ENST00000430328 RPL27AP46776 148 aaKnown RBP14.34□□□□□ -0.11
RIF1-204ENST00000430328 RPL31P62899 125 aaKnown RBP14.34□□□□□ -0.11
RIF1-204ENST00000430328 SNAI2O43623 268 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 PDLIM7Q9NR12 457 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 ZNF257Q9Y2Q1 563 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 ZNF205O95201 554 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 CD300CQ08708 224 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 C17orf47Q8NEP4 570 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 PGPEP1LA6NFU8 196 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 METTL12A8MUP2 240 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 OR4D11Q8NGI4 311 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 FAM106AQ4KMX7 169 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 MRAPQ8TCY5 172 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 DUX5Q96PT3 197 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 N4BP2Q86UW6 1770 aaPredicted RBP14.34□□□□□ -0.11
RIF1-204ENST00000430328 A0A1B0GTH9 108 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 H3BUT2 72 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 CD1AP06126 327 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 TIMM23BQ5SRD1 257 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 C6orf106Q9H6K1 298 aaPredicted RBP14.34□□□□□ -0.11
RIF1-204ENST00000430328 WNK2Q9Y3S1 2297 aa14.34□□□□□ -0.11
RIF1-204ENST00000430328 TRAV30A0A087WSZ9 112 aa14.33□□□□□ -0.11
RIF1-204ENST00000430328 ETHE1O95571 254 aa14.33□□□□□ -0.11
RIF1-204ENST00000430328 PRR35P0CG20 571 aa14.33□□□□□ -0.11
RIF1-204ENST00000430328 REG1BP48304 166 aa14.33□□□□□ -0.11
RIF1-204ENST00000430328 LSM6P62312 80 aaKnown RBP14.33□□□□□ -0.11
RIF1-204ENST00000430328 PIGYQ3MUY2 71 aa14.33□□□□□ -0.11
RIF1-204ENST00000430328 OR51G1Q8NGK1 321 aa14.33□□□□□ -0.11
RIF1-204ENST00000430328 CNRIP1Q96F85 164 aaPredicted RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms