RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 GNG12Q9UBI6 72 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 RPUSD1Q9UJJ7 312 aaKnown RBP7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 PSG11Q9UQ72 335 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 RNF222A6NCQ9 220 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 DBX1A6NMT0 343 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 PDLIM4P50479 330 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 PXDC1Q5TGL8 231 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 ZNF880Q6PDB4 577 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 ZNF818PQ6ZRF7 136 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 ACOT7LQ6ZUV0 252 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 IL17RELQ6ZVW7 336 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 Q8N7P7 452 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 ZNF565Q8N9K5 539 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 NEIL1Q96FI4 390 aaPredicted RBP7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 C5orf66Q9H5L9 145 aa7.8□□□□□ -1.16
HMGCLL1-206ENST00000428842 HIVEP2P31629 2446 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 TRGV10A0A0A0MS01 117 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 KANTRA0A1W2PQU2 76 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 CCSO14618 274 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 PROP1O75360 226 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 IGLV2-14P01704 120 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 CGB3P0DN86 165 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 CGB7P0DN87 165 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 DTYMKP23919 212 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 GAPTQ8N292 157 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 OR10J5Q8NHC4 309 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 PPP1R1CQ8WVI7 109 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 PHYHIPLQ96FC7 376 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 PHB2Q99623 299 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 PIMREGQ9BSJ6 248 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 COMMD9Q9P000 198 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 KCNS2Q9ULS6 477 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 VWC2LB2RUY7 222 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 TRIM77I1YAP6 450 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 DUS4LO95620 317 aaKnown RBP7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 PPYP01298 95 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 SLC9A3R2Q15599 337 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 HMGN3Q15651 99 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 IZUMO4Q1ZYL8 232 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 LHFPL4Q7Z7J7 247 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 STPG2Q8N412 459 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 OR51H1Q8NH63 302 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 CASTOR1Q8WTX7 329 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 GALMQ96C23 342 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 ZNF714Q96N38 554 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 PDCD10Q9BUL8 212 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 OR2D2Q9H210 308 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 NECAP2Q9NVZ3 263 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 KAAG1Q9UBP8 84 aa7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 RBM7Q9Y580 266 aaKnown RBP7.79□□□□□ -1.16
HMGCLL1-206ENST00000428842 LOC105371242A0A075B767 164 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 IGHV3-72A0A0B4J1Y9 119 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 KBTBD11-OT1A0A1B0GTJ5 212 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 ZNF16P17020 682 aaPredicted RBP7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 GNRHRP30968 328 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 RAB13P51153 203 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 CT45A1Q5HYN5 189 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 BRD3OSQ6XYD6 125 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 CT45A3Q8NHU0 189 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 TMEM230Q96A57 120 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 SEC22AQ96IW7 307 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 RTBDNQ9BSG5 229 aaPredicted RBP7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 RHOFQ9HBH0 211 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 KCNIP1Q9NZI2 227 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 A0A096LNT2 108 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 TRBV6-7A0A0A0MS04 114 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 TUSC2O75896 110 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 HEXAP06865 529 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 ZNF728P0DKX0 622 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 VAMP1P23763 118 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 DLX6P56179 175 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 TAS2R31P59538 309 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 BTN1A1Q13410 526 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 ATRQ13535 2644 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 VAX1Q5SQQ9 334 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 RUSC1-AS1Q66K80 236 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 TERB2Q8NHR7 220 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 MSI2Q96DH6 328 aaKnown RBP7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 MIOXQ9UGB7 285 aa7.78□□□□□ -1.16
HMGCLL1-206ENST00000428842 MPTX1A8MV57 137 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 LUMP51884 338 aaPredicted RBP7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 MRPS11P82912 194 aaKnown RBP7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 FAM189A2Q15884 450 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 TMEM155Q4W5P6 130 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 MORN2Q502X0 79 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 ACTBL2Q562R1 376 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 OR5D13Q8NGL4 314 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 TAF15Q92804 592 aaKnown RBP eCLIP7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 AGMATQ9BSE5 352 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 MS4A7Q9GZW8 240 aaPredicted RBP7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 hADV38S2A0JD32 116 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 TEX46H3BTG2 121 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 H7C1Q1 480 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 NXPH3O95157 252 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 RPL30P62888 115 aaKnown RBP7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 Q3ZCU0 254 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 LHFPL1Q86WI0 220 aa7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 H1FOOQ8IZA3 346 aaPredicted RBP7.77□□□□□ -1.17
HMGCLL1-206ENST00000428842 VKORC1L1Q8N0U8 176 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms