RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 AKR1C4P17516 323 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 KRTAP1-1Q07627 177 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 KLRD1Q13241 179 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 TATDN3Q17R31 274 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 ABCA11PQ4W5N1 156 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 RPL39P5Q59GN2 51 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 LDLRAD2Q5SZI1 272 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 GLDNQ6ZMI3 551 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-207ENST00000428404 ZNF833PQ6ZTB9 187 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 KCTD9Q7L273 389 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 LYG1Q8N1E2 194 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 OR10X1Q8NGY0 326 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 CAPSLQ8WWF8 208 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 RTN4IP1Q8WWV3 396 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-207ENST00000428404 GALNT14Q96FL9 552 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 AJUBAQ96IF1 538 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 BEX2Q9BXY8 128 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 C7orf69Q9H7B7 122 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 BEX1Q9HBH7 125 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 ITGB1BP2Q9UKP3 347 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 KCNS2Q9ULS6 477 aa10.15□□□□□ -0.78
TRIM39-207ENST00000428404 ZNF469Q96JG9 3925 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-207ENST00000428404 CELSR1Q9NYQ6 3014 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 CENPVL3A0A0U1RRI6 287 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 DUTP33316 252 aaKnown RBP10.14□□□□□ -0.79
TRIM39-207ENST00000428404 RPL30P62888 115 aaKnown RBP10.14□□□□□ -0.79
TRIM39-207ENST00000428404 PPP1R1AQ13522 171 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 FAM71F2Q6NXP2 309 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 SPNS3Q6ZMD2 512 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 ZNF66Q6ZN08 573 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 TBC1D26Q86UD7 250 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 CCDC71LQ8N9Z2 235 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 LHX4Q969G2 390 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 GPHA2Q96T91 129 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 S1PR3Q99500 378 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 HSD17B10Q99714 261 aaKnown RBP10.14□□□□□ -0.79
TRIM39-207ENST00000428404 NAA60Q9H7X0 242 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 TLN2Q9Y4G6 2542 aa10.14□□□□□ -0.79
TRIM39-207ENST00000428404 A0A0A6YYJ9 748 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 A0A1B0GVG6 124 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 C9orf170A2RU37 121 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 SNRPGP15A8MWD9 76 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 SMAD7O15105 426 aaKnown RBP10.13□□□□□ -0.79
TRIM39-207ENST00000428404 TNFSF12O43508 249 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 ARG1P05089 322 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 CT45A6P0DMU7 189 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 CT45A5P0DMU8 189 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 CT45A7P0DMV0 189 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 F2RP25116 425 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 IL3RAP26951 378 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 S100GP29377 79 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 BRWD1-AS2P59051 145 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 DHRS2Q13268 280 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 MIDNQ504T8 468 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 MINOS1Q5TGZ0 78 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 LYG2Q86SG7 212 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 SGPP2Q8IWX5 399 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 SEC22CQ9BRL7 303 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 DPM3Q9P2X0 92 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 AMMECR1Q9Y4X0 333 aaPredicted RBP10.13□□□□□ -0.79
TRIM39-207ENST00000428404 ALG5Q9Y673 324 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 MINOS1-NBL1R4GNA1 71 aa10.13□□□□□ -0.79
TRIM39-207ENST00000428404 IGHV1-69DA0A0B4J2H0 117 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 TEX13DA0A0J9YY54 714 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-207ENST00000428404 LINC00473A8K010 186 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 RNF212BA8MTL3 300 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 LEUTXA8MZ59 168 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 M0R1X1 148 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 B3GALNT1O75752 331 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 SFT2D2O95562 160 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 DUS4LO95620 317 aaKnown RBP10.12□□□□□ -0.79
TRIM39-207ENST00000428404 FSHBP01225 129 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 IGHV1-69P01742 117 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 ZNF16P17020 682 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-207ENST00000428404 HTR1DP28221 377 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 LINC00205P59089 165 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 ZNF816Q0VGE8 651 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-207ENST00000428404 DIAPH2-AS1Q14236 149 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 TMEM187Q14656 261 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 C4orf46Q504U0 113 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 KLF17Q5JT82 389 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-207ENST00000428404 PDZD9Q8IXQ8 264 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 PIP4P2Q8N4L2 257 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 TCTEX1D1Q8N7M0 179 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 ZNF383Q8NA42 475 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 OR52B4Q8NGK2 314 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 ZNF431Q8TF32 576 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-207ENST00000428404 GLYATL2Q8WU03 294 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 MITD1Q8WV92 249 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 DDB2Q92466 427 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 ADTRPQ96IZ2 230 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 TP53RKQ96S44 253 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 FAM212BQ9NTI7 297 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-207ENST00000428404 KCNIP3Q9Y2W7 256 aa10.12□□□□□ -0.79
TRIM39-207ENST00000428404 TBL2Q9Y4P3 447 aaKnown RBP10.12□□□□□ -0.79
TRIM39-207ENST00000428404 A0A0B4J2A0 478 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 C3orf85A0A1B0GTC6 90 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 H0Y980 276 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 NPFFO15130 113 aa10.11□□□□□ -0.79
TRIM39-207ENST00000428404 CD5LO43866 347 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms