RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 SUMO3P55854 103 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-206ENST00000428313 SPANXN5Q5MJ07 72 aa13.64□□□□□ -0.23
C9orf3-206ENST00000428313 APOBEC3DQ96AK3 386 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-206ENST00000428313 SOHLH2Q9NX45 425 aa13.64□□□□□ -0.23
C9orf3-206ENST00000428313 GAGE12BA1L429 117 aa13.64□□□□□ -0.23
C9orf3-206ENST00000428313 PGPEP1LA6NFU8 196 aa13.64□□□□□ -0.23
C9orf3-206ENST00000428313 TMEM150CB9EJG8 249 aa13.64□□□□□ -0.23
C9orf3-206ENST00000428313 CRYAAP02489 173 aa13.64□□□□□ -0.23
C9orf3-206ENST00000428313 DEFB125Q8N687 156 aa13.64□□□□□ -0.23
C9orf3-206ENST00000428313 THAP3Q8WTV1 239 aaPredicted RBP13.64□□□□□ -0.23
C9orf3-206ENST00000428313 TRBV20OR9-2A0A075B6H5 130 aa13.63□□□□□ -0.23
C9orf3-206ENST00000428313 LRP5LA4QPB2 252 aa13.63□□□□□ -0.23
C9orf3-206ENST00000428313 EGR1P18146 543 aa13.63□□□□□ -0.23
C9orf3-206ENST00000428313 ATP5G3P48201 142 aa13.63□□□□□ -0.23
C9orf3-206ENST00000428313 CDC34P49427 236 aaPredicted RBP13.63□□□□□ -0.23
C9orf3-206ENST00000428313 RPEL1Q2QD12 228 aa13.63□□□□□ -0.23
C9orf3-206ENST00000428313 DCAF12Q5T6F0 453 aa13.63□□□□□ -0.23
C9orf3-206ENST00000428313 VASH2Q86V25 355 aa13.63□□□□□ -0.23
C9orf3-206ENST00000428313 KIR2DS1A0A191URI9 304 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A10PA6NDY2 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A18PA6NE21 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A16PA6NEW6 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A20PA6NIJ5 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A8PA6NJQ4 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A7PA6NKC0 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A22PA8MWA6 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A12PA8MX19 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A5PA8MXJ8 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A23PA8MXZ1 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 B4DGG1 531 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 H0YJW9 148 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 M0R135 149 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A15PP0C7V4 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A13PP0C7W8 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A14PP0C7W9 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 FAM90A24PP0C7X0 464 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 PSG2P11465 335 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 KIR2DS4P43632 304 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 CAPZBP47756 277 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 KIR2DS1Q14954 304 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 RSPO1Q2MKA7 263 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-206ENST00000428313 CARD17Q5XLA6 110 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 ZNF776Q68DI1 518 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-206ENST00000428313 ZNF324BQ6AW86 544 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-206ENST00000428313 OR10P1Q8NGE3 313 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 OR4S2Q8NH73 311 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 PATE1Q8WXA2 126 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 RDH5Q92781 318 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 RAB1CQ92928 201 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 ZNF799Q96GE5 643 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 MTIF3Q9H2K0 278 aaKnown RBP13.62□□□□□ -0.23
C9orf3-206ENST00000428313 CD207Q9UJ71 328 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 NCOA6Q14686 2063 aaPredicted RBP13.62□□□□□ -0.23
C9orf3-206ENST00000428313 TNFP01375 233 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 PMP22Q01453 160 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 RCHY1Q96PM5 261 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 LY96Q9Y6Y9 160 aa13.62□□□□□ -0.23
C9orf3-206ENST00000428313 IGKV3D-11A0A0A0MRZ8 115 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 C9orf172C9J069 976 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 SCTP09683 121 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 CD46P15529 392 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 IZUMO4Q1ZYL8 232 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 AMMECR1LQ6DCA0 310 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 ZNF441Q8N8Z8 693 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 OCC1Q8TAD7 63 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 FBRSQ9HAH7 460 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 OBP2AQ9NY56 170 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 PTPRSQ13332 1948 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 OR2T8A6NH00 312 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 IGKV1-39P01597 117 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 IGKV1D-39P04432 117 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 PLA2G5P39877 138 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 MRPL49Q13405 166 aaKnown RBP13.61□□□□□ -0.23
C9orf3-206ENST00000428313 TMEM42Q69YG0 159 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 FAM58AQ8N1B3 248 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 TSKUQ8WUA8 353 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 SPTSSAQ969W0 71 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 CLEC7AQ9BXN2 247 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 NPCDR1Q9BY65 106 aa13.61□□□□□ -0.23
C9orf3-206ENST00000428313 ODAMA1E959 279 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 H3BML4 177 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 OR7C1O76099 320 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-206ENST00000428313 IGLL1P15814 213 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 CD38P28907 300 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 GUCA1AP43080 201 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-206ENST00000428313 CCR5P51681 352 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 RIPPLY3P57055 190 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 HTD2P86397 168 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 DAZAP2Q15038 168 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-206ENST00000428313 MMD2Q8IY49 270 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 ATOH7Q8N100 152 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 BATF2Q8N1L9 274 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 NAT8BQ9UHF3 227 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 IGKV1-5P01602 117 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 PRSS57Q6UWY2 283 aa13.6□□□□□ -0.23
C9orf3-206ENST00000428313 ARHGAP21Q5T5U3 1957 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 TLX3O43711 291 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-206ENST00000428313 THBS3P49746 956 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 PAX2Q02962 417 aa13.59□□□□□ -0.23
C9orf3-206ENST00000428313 C17orf67Q0P5P2 114 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms