RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 OR11H12B2RN74 326 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 C16orf97H3BN30 126 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 IGF2P01344 180 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 AGAP20933 346 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 IRF3Q14653 427 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 OR11H1Q8NG94 326 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 OR11H2Q8NH07 326 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 METTL1Q9UBP6 276 aaKnown RBP12.56□□□□□ -0.4
PTPN13-203ENST00000427191 ATP5LO75964 103 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 LINC00869P0C866 280 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 FGF12P61328 243 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 HIST1H1AQ02539 215 aaPredicted RBP12.56□□□□□ -0.4
PTPN13-203ENST00000427191 SAXO1Q8IYX7 474 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 OR52M1Q8NGK5 317 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 TIMP4Q99727 224 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 NPIPB8E9PQR5 432 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 WNT5AP41221 380 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 HES3Q5TGS1 186 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 Q6AWC8 147 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 ADAD2Q8NCV1 583 aaKnown RBP12.56□□□□□ -0.4
PTPN13-203ENST00000427191 A1L4Q6 167 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 GPR82Q96P67 336 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 KCNK7Q9Y2U2 307 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 DOCK9Q9BZ29 2069 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 ZCCHC14Q8WYQ9 949 aaKnown RBP12.56□□□□□ -0.4
PTPN13-203ENST00000427191 SHISA8B8ZZ34 492 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 TMEM171Q8WVE6 324 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 AICDAQ9GZX7 198 aa12.56□□□□□ -0.4
PTPN13-203ENST00000427191 NDUFB4O95168 129 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 MNX1P50219 401 aaPredicted RBP12.55□□□□□ -0.4
PTPN13-203ENST00000427191 MFAP4P55083 255 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 ZP4Q12836 540 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 HSF4Q9ULV5 492 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 DNAJC4Q9NNZ3 241 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 RNASE1P07998 156 aaKnown RBP12.55□□□□□ -0.4
PTPN13-203ENST00000427191 FCGR3AP08637 254 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 IFI6P09912 130 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 HBBP68871 147 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 C10orf111Q8N326 155 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 PPIAL4EA0A075B759 164 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 C2CD4DB7Z1M9 353 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 PPIAL4DF5H284 164 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 PPIAL4FP0DN26 164 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 MUC1P15941 1255 aaPredicted RBP12.55□□□□□ -0.4
PTPN13-203ENST00000427191 PPIAL4AQ9Y536 164 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 CLDN14O95500 239 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 SPEM2Q0P670 501 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 GUSBP11Q6P575 273 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 WNT5BQ9H1J7 359 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 TREM2Q9NZC2 230 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 DMRTC1Q5HYR2 192 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 GAB4Q2WGN9 574 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 PIGYQ3MUY2 71 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 PLSCR2Q9NRY7 297 aa12.55□□□□□ -0.4
PTPN13-203ENST00000427191 ISG15P05161 165 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 VSIG8P0DPA2 414 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 FAM27BQ5VT28 67 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 LIFP15018 202 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 LCN2P80188 198 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 CLEC2AQ6UVW9 174 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 OR4D5Q8NGN0 318 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 ZNF414Q96IQ9 312 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 RBMY1BA6NDE4 496 aaKnown RBP12.54□□□□□ -0.4
PTPN13-203ENST00000427191 RBMY1EA6NEQ0 496 aaKnown RBP12.54□□□□□ -0.4
PTPN13-203ENST00000427191 RBMY1DP0C7P1 496 aaKnown RBP12.54□□□□□ -0.4
PTPN13-203ENST00000427191 RNF224P0DH78 156 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 RBMY1A1P0DJD3 496 aaKnown RBP12.54□□□□□ -0.4
PTPN13-203ENST00000427191 RBMY1CP0DJD4 496 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 NUTF2P61970 127 aaKnown RBP12.54□□□□□ -0.4
PTPN13-203ENST00000427191 PSMG3Q9BT73 122 aaPredicted RBP12.54□□□□□ -0.4
PTPN13-203ENST00000427191 IL36RNQ9UBH0 155 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 CTGFP29279 349 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 RBKSQ9H477 322 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 NUBP1P53384 320 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 CX3CL1P78423 397 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 ZNF506Q5JVG8 444 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 UBTD1Q9HAC8 227 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 CCL2P13500 99 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 LINC01555Q8NAE3 123 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 TMEM30AQ9NV96 361 aa12.54□□□□□ -0.4
PTPN13-203ENST00000427191 A0A1W2PR80 420 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 EML2O95834 649 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 FAM209BQ5JX69 171 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 OR51G1Q8NGK1 321 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 A0A1B0GTL3 188 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 GLIPR1P48060 266 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 KRTCAP3Q53RY4 240 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 CT55Q8WUE5 264 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 HIST1H2BAQ96A08 127 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 PAPPAQ13219 1627 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 TRGC2P03986 189 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 TRIP6Q15654 476 aaKnown RBP12.53□□□□□ -0.4
PTPN13-203ENST00000427191 TSPAN7P41732 249 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 SOX8P57073 446 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 COL10A1Q03692 680 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 TAF15Q92804 592 aaKnown RBP eCLIP12.53□□□□□ -0.4
PTPN13-203ENST00000427191 TRBV23-1A0A0A0MS06 115 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 NPFFO15130 113 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 ASAH2BP0C7U1 165 aa12.53□□□□□ -0.4
PTPN13-203ENST00000427191 C8orf88P0DMB2 117 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms