RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 AKR1E2Q96JD6 320 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 YPEL2Q96QA6 119 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 NABP2Q9BQ15 211 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 HSPB9Q9BQS6 159 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 MRPL20Q9BYC9 149 aaKnown RBP10.05□□□□□ -0.8
GPC1-204ENST00000426280 SLIRPQ9GZT3 109 aaKnown RBP10.05□□□□□ -0.8
GPC1-204ENST00000426280 IFI27L2Q9H2X8 130 aa10.05□□□□□ -0.8
GPC1-204ENST00000426280 CCDC59Q9P031 241 aaKnown RBP10.05□□□□□ -0.8
GPC1-204ENST00000426280 MRPS7Q9Y2R9 242 aaKnown RBP10.05□□□□□ -0.8
GPC1-204ENST00000426280 NCBP2LA6PVI3 153 aaKnown RBP10.04□□□□□ -0.8
GPC1-204ENST00000426280 FGF16O43320 207 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 LANCL1O43813 399 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 IGHG2P01859 326 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 HLA-DQB1P01920 261 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 LSAMPQ13449 338 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 RPL39P5Q59GN2 51 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 IGSF11Q5DX21 431 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 LAX1Q8IWV1 398 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 GVQW1Q8N7I0 195 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 OR2T10Q8NGZ9 312 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 ABHD14BQ96IU4 210 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 CMTM3Q96MX0 182 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 S1PR3Q99500 378 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 ABHD14AQ9BUJ0 271 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 ST6GALNAC5Q9BVH7 336 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 RAB9BQ9NP90 201 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 SLC23A1Q9UHI7 598 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 JPT1Q9UK76 154 aa10.04□□□□□ -0.8
GPC1-204ENST00000426280 SAA2-SAA4A0A096LPE2 208 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 M0QZK8 103 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 RGS5O15539 181 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 FABP7O15540 132 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 MOSP00540 346 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 SAA2P0DJI9 122 aaPredicted RBP10.03□□□□□ -0.8
GPC1-204ENST00000426280 DTYMKP23919 212 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 LY6G6FQ5SQ64 297 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 STEAP3Q658P3 488 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 GLDNQ6ZMI3 551 aaPredicted RBP10.03□□□□□ -0.8
GPC1-204ENST00000426280 ZNF833PQ6ZTB9 187 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 SLC35E3Q7Z769 313 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 SNX29P2Q8IUI4 249 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 C6orf62Q9GZU0 229 aaPredicted RBP10.03□□□□□ -0.8
GPC1-204ENST00000426280 C11orf54Q9H0W9 315 aaPredicted RBP10.03□□□□□ -0.8
GPC1-204ENST00000426280 EXTL2Q9UBQ6 330 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 RNF150Q9ULK6 438 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 MGAT4AQ9UM21 535 aa10.03□□□□□ -0.8
GPC1-204ENST00000426280 SMIM31A0A1B0GVY4 71 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 PSMB11A5LHX3 300 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 ZNF701M0R085 212 aaPredicted RBP10.02□□□□□ -0.81
GPC1-204ENST00000426280 BET1O15155 118 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 HSPA12AO43301 675 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 CT45A6P0DMU7 189 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 CT45A5P0DMU8 189 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 CT45A7P0DMV0 189 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 IL3RAP26951 378 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 CEACAM6P40199 344 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 GPR12P47775 334 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 PITPNAQ00169 270 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 TMEM30BQ3MIR4 351 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 RNASE12Q5GAN4 147 aaKnown RBP10.02□□□□□ -0.81
GPC1-204ENST00000426280 CNIH2Q6PI25 160 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 ETV3LQ6ZN32 361 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 STPG2Q8N412 459 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 FAM71E2Q8N5Q1 922 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 OR4A4PQ8NGN8 299 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 MCFD2Q8NI22 146 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 AGMATQ9BSE5 352 aa10.02□□□□□ -0.81
GPC1-204ENST00000426280 PLXNB1O43157 2135 aa10.01□□□□□ -0.81
GPC1-204ENST00000426280 IGLL1P15814 213 aa10.01□□□□□ -0.81
GPC1-204ENST00000426280 KIR2DS1Q14954 304 aa10.01□□□□□ -0.81
GPC1-204ENST00000426280 SRSF7Q16629 238 aaKnown RBP eCLIP10.01□□□□□ -0.81
GPC1-204ENST00000426280 KPRPQ5T749 579 aaPredicted RBP10.01□□□□□ -0.81
GPC1-204ENST00000426280 Q6ZS49 121 aa10.01□□□□□ -0.81
GPC1-204ENST00000426280 WFDC9Q8NEX5 89 aa10.01□□□□□ -0.81
GPC1-204ENST00000426280 C5orf30Q96GV9 206 aa10.01□□□□□ -0.81
GPC1-204ENST00000426280 DUX3Q96PT4 197 aa10.01□□□□□ -0.81
GPC1-204ENST00000426280 CABLES2Q9BTV7 478 aa10.01□□□□□ -0.81
GPC1-204ENST00000426280 NXF2Q9GZY0 626 aaKnown RBP10.01□□□□□ -0.81
GPC1-204ENST00000426280 LIN7CQ9NUP9 197 aaKnown RBP10.01□□□□□ -0.81
GPC1-204ENST00000426280 ZNF107Q9UII5 783 aaPredicted RBP10.01□□□□□ -0.81
GPC1-204ENST00000426280 TSSC4Q9Y5U2 329 aaPredicted RBP10.01□□□□□ -0.81
GPC1-204ENST00000426280 FCN1O00602 326 aa10□□□□□ -0.81
GPC1-204ENST00000426280 ZBTB25P24278 435 aa10□□□□□ -0.81
GPC1-204ENST00000426280 PRSS3P35030 304 aa10□□□□□ -0.81
GPC1-204ENST00000426280 ACTBP60709 375 aa10□□□□□ -0.81
GPC1-204ENST00000426280 CFHR3Q02985 330 aa10□□□□□ -0.81
GPC1-204ENST00000426280 HOGA1Q86XE5 327 aa10□□□□□ -0.81
GPC1-204ENST00000426280 DRAXINQ8NBI3 349 aaPredicted RBP10□□□□□ -0.81
GPC1-204ENST00000426280 BEST4Q8NFU0 473 aa10□□□□□ -0.81
GPC1-204ENST00000426280 OR4F17Q8NGA8 305 aa10□□□□□ -0.81
GPC1-204ENST00000426280 OR4X2Q8NGF9 303 aa10□□□□□ -0.81
GPC1-204ENST00000426280 SNAPC3Q92966 411 aa10□□□□□ -0.81
GPC1-204ENST00000426280 DGCR14Q96DF8 476 aaKnown RBP10□□□□□ -0.81
GPC1-204ENST00000426280 OR4F4Q96R69 305 aa10□□□□□ -0.81
GPC1-204ENST00000426280 ABHD1Q96SE0 405 aa10□□□□□ -0.81
GPC1-204ENST00000426280 RDH8Q9NYR8 311 aa10□□□□□ -0.81
GPC1-204ENST00000426280 ANXA10Q9UJ72 324 aa10□□□□□ -0.81
GPC1-204ENST00000426280 NOTCH1P46531 2555 aa9.99□□□□□ -0.81
GPC1-204ENST00000426280 TRBV6-7A0A0A0MS04 114 aa9.99□□□□□ -0.81
GPC1-204ENST00000426280 G3V318 75 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms