RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 EHFQ9NZC4 300 aa19.61■□□□□ 0.73
VEGFA-209ENST00000425836 IGKV1D-13A0A0B4J2D9 117 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 IGKV1D-33P01593 117 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 IGKV1-33P01594 117 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 CRYBA1P05813 215 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 CT45A6P0DMU7 189 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 CT45A5P0DMU8 189 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 CT45A7P0DMV0 189 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 IGKV1-13P0DP09 117 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 AADACP22760 399 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 ACTBP60709 375 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 ACTG1P63261 375 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 LSAMPQ13449 338 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 DYRK1AQ13627 763 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.6■□□□□ 0.73
VEGFA-209ENST00000425836 C5orf30Q96GV9 206 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 MDFIQ99750 246 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 SDHAF2Q9NX18 166 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 C1RLQ9NZP8 487 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 V9GYH0 126 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 ATRQ13535 2644 aa19.6■□□□□ 0.73
VEGFA-209ENST00000425836 EBI3Q14213 229 aa19.59■□□□□ 0.73
VEGFA-209ENST00000425836 CNPY1Q3B7I2 92 aa19.59■□□□□ 0.73
VEGFA-209ENST00000425836 DHRS7BQ6IAN0 325 aaPredicted RBP19.59■□□□□ 0.73
VEGFA-209ENST00000425836 RBMXL1Q96E39 390 aaKnown RBP19.59■□□□□ 0.73
VEGFA-209ENST00000425836 RAB18Q9NP72 206 aa19.59■□□□□ 0.73
VEGFA-209ENST00000425836 HKR1P10072 659 aa19.58■□□□□ 0.73
VEGFA-209ENST00000425836 RELBQ01201 579 aa19.58■□□□□ 0.73
VEGFA-209ENST00000425836 HES1Q14469 280 aa19.58■□□□□ 0.73
VEGFA-209ENST00000425836 DHRS11Q6UWP2 260 aa19.58■□□□□ 0.73
VEGFA-209ENST00000425836 GSTZ1O43708 216 aaPredicted RBP19.57■□□□□ 0.72
VEGFA-209ENST00000425836 PPYP01298 95 aa19.57■□□□□ 0.72
VEGFA-209ENST00000425836 HNF4GQ14541 408 aa19.57■□□□□ 0.72
VEGFA-209ENST00000425836 ZNF660Q6AZW8 331 aaPredicted RBP19.57■□□□□ 0.72
VEGFA-209ENST00000425836 DRAXINQ8NBI3 349 aaPredicted RBP19.57■□□□□ 0.72
VEGFA-209ENST00000425836 EAF1Q96JC9 268 aaPredicted RBP19.57■□□□□ 0.72
VEGFA-209ENST00000425836 RBM14Q96PK6 669 aaKnown RBP19.57■□□□□ 0.72
VEGFA-209ENST00000425836 RBMX2Q9Y388 322 aaKnown RBP19.57■□□□□ 0.72
VEGFA-209ENST00000425836 M0R1X1 148 aa19.57■□□□□ 0.72
VEGFA-209ENST00000425836 OR2F2O95006 317 aa19.57■□□□□ 0.72
VEGFA-209ENST00000425836 TMEM11P17152 192 aa19.57■□□□□ 0.72
VEGFA-209ENST00000425836 LINC00205P59089 165 aa19.57■□□□□ 0.72
VEGFA-209ENST00000425836 SSBP1Q04837 148 aaKnown RBP19.57■□□□□ 0.72
VEGFA-209ENST00000425836 GLDNQ6ZMI3 551 aaPredicted RBP19.57■□□□□ 0.72
VEGFA-209ENST00000425836 SLC25A33Q9BSK2 321 aa19.57■□□□□ 0.72
VEGFA-209ENST00000425836 IGLV2-14P01704 120 aa19.56■□□□□ 0.72
VEGFA-209ENST00000425836 CD3DP04234 171 aa19.56■□□□□ 0.72
VEGFA-209ENST00000425836 ETV6P41212 452 aa19.56■□□□□ 0.72
VEGFA-209ENST00000425836 ACTBL2Q562R1 376 aa19.56■□□□□ 0.72
VEGFA-209ENST00000425836 ZNF645Q8N7E2 425 aa19.56■□□□□ 0.72
VEGFA-209ENST00000425836 OR2T10Q8NGZ9 312 aa19.56■□□□□ 0.72
VEGFA-209ENST00000425836 TMEM89A2RUT3 159 aa19.55■□□□□ 0.72
VEGFA-209ENST00000425836 M0QYG6 137 aa19.55■□□□□ 0.72
VEGFA-209ENST00000425836 MOSP00540 346 aa19.55■□□□□ 0.72
VEGFA-209ENST00000425836 PTBP1P26599 531 aaKnown RBP eCLIP19.55■□□□□ 0.72
VEGFA-209ENST00000425836 ZNF79Q15937 498 aa19.55■□□□□ 0.72
VEGFA-209ENST00000425836 SPANXN2Q5MJ10 180 aa19.55■□□□□ 0.72
VEGFA-209ENST00000425836 VAX1Q5SQQ9 334 aa19.55■□□□□ 0.72
VEGFA-209ENST00000425836 C16orf82Q7Z2V1 217 aa19.55■□□□□ 0.72
VEGFA-209ENST00000425836 Q8N6K4 173 aa19.55■□□□□ 0.72
VEGFA-209ENST00000425836 ZNF383Q8NA42 475 aa19.55■□□□□ 0.72
VEGFA-209ENST00000425836 TMEM229BQ8NBD8 167 aa19.55■□□□□ 0.72
VEGFA-209ENST00000425836 OR5AN1Q8NGI8 311 aa19.55■□□□□ 0.72
VEGFA-209ENST00000425836 ZNF2Q9BSG1 426 aaPredicted RBP19.55■□□□□ 0.72
VEGFA-209ENST00000425836 H0YJW9 148 aa19.54■□□□□ 0.72
VEGFA-209ENST00000425836 SLC22A5O76082 557 aa19.54■□□□□ 0.72
VEGFA-209ENST00000425836 NDUFA7O95182 113 aa19.54■□□□□ 0.72
VEGFA-209ENST00000425836 FXYD4P59646 89 aa19.54■□□□□ 0.72
VEGFA-209ENST00000425836 PYDC2Q56P42 97 aa19.54■□□□□ 0.72
VEGFA-209ENST00000425836 Q6ZSV7 163 aa19.54■□□□□ 0.72
VEGFA-209ENST00000425836 OR6F1Q8NGZ6 308 aa19.54■□□□□ 0.72
VEGFA-209ENST00000425836 SECTM1Q8WVN6 248 aa19.54■□□□□ 0.72
VEGFA-209ENST00000425836 ZNF107Q9UII5 783 aaPredicted RBP19.54■□□□□ 0.72
VEGFA-209ENST00000425836 TAS2R19P59542 299 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 TINAGL1Q9GZM7 467 aaPredicted RBP19.53■□□□□ 0.72
VEGFA-209ENST00000425836 NPFFR1Q9GZQ6 430 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 OR5H14A6NHG9 310 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 TSPAN9O75954 239 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 CD74P04233 296 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 TBPP20226 339 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 RAG2P55895 527 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 HERV-K104P61576 105 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 TSPAN5P62079 268 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 RNASE10Q5GAN6 216 aaKnown RBP19.53■□□□□ 0.72
VEGFA-209ENST00000425836 MOB3AQ96BX8 217 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 AKR1E2Q96JD6 320 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 THAP7Q9BT49 309 aaPredicted RBP19.53■□□□□ 0.72
VEGFA-209ENST00000425836 SLC5A7Q9GZV3 580 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 CCL28Q9NRJ3 127 aa19.53■□□□□ 0.72
VEGFA-209ENST00000425836 CSF1P09603 554 aa19.52■□□□□ 0.71
VEGFA-209ENST00000425836 MC5RP33032 325 aa19.52■□□□□ 0.71
VEGFA-209ENST00000425836 DUTP33316 252 aaKnown RBP19.52■□□□□ 0.71
VEGFA-209ENST00000425836 BLCAPP62952 87 aa19.52■□□□□ 0.71
VEGFA-209ENST00000425836 OR4D10Q8NGI6 311 aa19.52■□□□□ 0.71
VEGFA-209ENST00000425836 RITA1Q96K30 269 aa19.52■□□□□ 0.71
VEGFA-209ENST00000425836 MOB4Q9Y3A3 225 aa19.52■□□□□ 0.71
VEGFA-209ENST00000425836 AMY1AP04745 511 aa19.51■□□□□ 0.71
VEGFA-209ENST00000425836 AMY2AP04746 511 aa19.51■□□□□ 0.71
VEGFA-209ENST00000425836 STEAP1BQ6NZ63 245 aa19.51■□□□□ 0.71
VEGFA-209ENST00000425836 TMEM17Q86X19 198 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms