RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 CHD3Q12873 2000 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 LRP5LA4QPB2 252 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 TGOLN2O43493 480 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 PAGE4O60829 102 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 TFF1P04155 84 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 GZMHP20718 246 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 PKIAP61925 76 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 RPL23P62829 140 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 TNFRSF9Q07011 255 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 MED12LQ86YW9 2145 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF709Q8N972 641 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 OR52L2PQ8NGH6 319 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 TTTY12Q9BZ98 90 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 OR2J1Q9GZK6 312 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 DEFB127Q9H1M4 99 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 OR2D2Q9H210 308 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 PARLQ9H300 379 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 KCNIP1Q9NZI2 227 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 MRPS18CQ9Y3D5 142 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 NBEAQ8NFP9 2946 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 GTF3C1Q12789 2109 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 EGR1P18146 543 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 CHRNA7P36544 502 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 RPL30P62888 115 aaKnown RBP6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 USF2Q15853 346 aaPredicted RBP6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF497Q6ZNH5 498 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 ZDHHC16Q969W1 377 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 RTL8AQ9BWD3 113 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 SRD5A3Q9H8P0 318 aa6.35□□□□□ -1.39
SMARCC1-202ENST00000425518 PRR14LQ5THK1 2151 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 SH2D1BO14796 132 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 ZG16O60844 167 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 KBTBD11O94819 623 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 IFNA10P01566 189 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 PFN1P07737 140 aaKnown RBP6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 CELA3BP08861 270 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 RAC2P15153 192 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 P2RY6Q15077 328 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 MSMO1Q15800 293 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 LTC4SQ16873 150 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 CYP2G1PQ6ZSU1 146 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 WDR86Q86TI4 376 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 OR10P1Q8NGE3 313 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 RFESDQ8TAC1 157 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 PLPPR2Q96GM1 343 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 CDX2Q99626 313 aaPredicted RBP6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 PKIBQ9C010 78 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 FUT9Q9Y231 359 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 DEFB108AA8MXU0 73 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 GALR2O43603 387 aaPredicted RBP6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 CRYAAP02489 173 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 AMBPP02760 352 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 UBE2G2P60604 165 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 TFF3Q07654 80 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 AESQ08117 197 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 ZNF826PQ6ZT77 177 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 TMEM183AQ8IXX5 376 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 TPRX1Q8N7U7 411 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 OR1P1Q8NH06 330 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 RAB24Q969Q5 203 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 WFIKKN1Q96NZ8 548 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 CDH20Q9HBT6 801 aa6.34□□□□□ -1.39
SMARCC1-202ENST00000425518 IGHV3-43A0A0B4J1X8 118 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 S1PR2O95136 353 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 CER1O95813 267 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 IL18BPO95998 194 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 IGHV3-43DP0DP04 118 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 FAM3BP58499 235 aaPredicted RBP6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 CST9LP1Q5W188 147 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 TMEM14EPQ6UXP3 125 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 MOB1BQ7L9L4 216 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 REC114Q7Z4M0 266 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 OR51G1Q8NGK1 321 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 WDYHV1Q96HA8 205 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 ACTR3CQ9C0K3 210 aaPredicted RBP6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 OBP2BQ9NPH6 170 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 WASF3Q9UPY6 502 aa6.34□□□□□ -1.4
SMARCC1-202ENST00000425518 CTXND1A0A1B0GTU2 59 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 ODAMA1E959 279 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 RNF212BA8MTL3 300 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 C17orf98A8MV24 154 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 WNT9BO14905 357 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 SS18L1O75177 396 aaPredicted RBP6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 GYPAP02724 150 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 PRSS8Q16651 343 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 MRGPRDQ8TDS7 321 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 NINJ1Q92982 152 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 GALMQ96C23 342 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 SDSLQ96GA7 329 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 TMEM147Q9BVK8 224 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 POLDIP2Q9Y2S7 368 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 C1QTNF9BB2RNN3 333 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 B4E171 279 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 PSPNO60542 156 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 COX5AP20674 150 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 TSPAN7P41732 249 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 GABRA2P47869 451 aa6.33□□□□□ -1.4
SMARCC1-202ENST00000425518 DTD1Q8TEA8 209 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms