RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 HLA-DRB5Q30154 266 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 ABCA11PQ4W5N1 156 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 OR52M1Q8NGK5 317 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 OR13D1Q8NGV5 346 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 C1orf159Q96HA4 380 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 C18orf12Q96KH6 178 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 ZNF251Q9BRH9 671 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 MRPL20Q9BYC9 149 aaKnown RBP10.89□□□□□ -0.67
PRPF39-202ENST00000424478 SETD2Q9BYW2 2564 aaPredicted RBP10.89□□□□□ -0.67
PRPF39-202ENST00000424478 FN1P02751 2386 aaKnown RBP10.89□□□□□ -0.67
PRPF39-202ENST00000424478 RGS11O94810 467 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 EDARADDQ8WWZ3 215 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 POM121CA8CG34 1229 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 BUB1B-PAK6H3BSN5 160 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 CBX3Q13185 183 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 PPP1R1AQ13522 171 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 TBC1D26Q86UD7 250 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 KIR3DL3Q8N743 410 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 UXS1Q8NBZ7 420 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 HEXA-AS1Q9H8Q6 139 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 ZNF221Q9UK13 617 aa10.89□□□□□ -0.67
PRPF39-202ENST00000424478 A0A087X0M5 115 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 A0A1B0GX30 115 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 INMT-MINDY4F8WBC2 141 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 RAMP3O60896 148 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 C4orf46Q504U0 113 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 NCR3LG1Q68D85 454 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 ZNF626Q68DY1 528 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 FAM219AQ8IW50 185 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 ZNF645Q8N7E2 425 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 DUSP18Q8NEJ0 188 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 RSRP1Q9BUV0 290 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 JMJD1CQ15652 2540 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 A0A0U1RQK1 487 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 PGLYRP1O75594 196 aaPredicted RBP10.88□□□□□ -0.67
PRPF39-202ENST00000424478 LY6G6DO95868 133 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 SUPT4H1P63272 117 aaKnown RBP10.88□□□□□ -0.67
PRPF39-202ENST00000424478 TAGLNQ01995 201 aaKnown RBP10.88□□□□□ -0.67
PRPF39-202ENST00000424478 CHPT1Q8WUD6 406 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 RTN4IP1Q8WWV3 396 aaPredicted RBP10.88□□□□□ -0.67
PRPF39-202ENST00000424478 TP53RKQ96S44 253 aa10.88□□□□□ -0.67
PRPF39-202ENST00000424478 C14orf166Q9Y224 244 aaKnown RBP10.88□□□□□ -0.67
PRPF39-202ENST00000424478 TEX13DA0A0J9YY54 714 aaPredicted RBP10.87□□□□□ -0.67
PRPF39-202ENST00000424478 RAB9BQ9NP90 201 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 TNFRSF19Q9NS68 423 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 COPZ2Q9P299 210 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 LGALS4P56470 323 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 BRWD1-AS2P59051 145 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 HNF4GQ14541 408 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 GPR157Q5UAW9 335 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 OR11H6Q8NGC7 330 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 OR10A7Q8NGE5 316 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 TCTEX1D2Q8WW35 142 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 AJUBAQ96IF1 538 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 SLC25A21Q9BQT8 299 aaPredicted RBP10.87□□□□□ -0.67
PRPF39-202ENST00000424478 ODF3BA8MYP8 253 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 GPR31O00270 319 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 RAB29O14966 203 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 NPFFO15130 113 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 RBP4P02753 201 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 OR5AC1P0C628 307 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 EPHA1P21709 976 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 PRRX1P54821 245 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 ZNF816Q0VGE8 651 aaPredicted RBP10.87□□□□□ -0.67
PRPF39-202ENST00000424478 SLC38A6Q8IZM9 456 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 ZNF383Q8NA42 475 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 RITA1Q96K30 269 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 NUBP2Q9Y5Y2 271 aa10.87□□□□□ -0.67
PRPF39-202ENST00000424478 IGHV1-69DA0A0B4J2H0 117 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 IGHV1-69P01742 117 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 OR4E1P0C645 316 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 CT45A6P0DMU7 189 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 CT45A5P0DMU8 189 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 CT45A7P0DMV0 189 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 HTR1DP28221 377 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 TATDN3Q17R31 274 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 IZUMO4Q1ZYL8 232 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 C1orf122Q6ZSJ8 110 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 MOB3BQ86TA1 216 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 VKORC1L1Q8N0U8 176 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 ST6GALNAC6Q969X2 333 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 TOLLIPQ9H0E2 274 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 UNKLQ9H9P5 680 aaKnown RBP10.86□□□□□ -0.67
PRPF39-202ENST00000424478 HLA-AP01891 365 aaKnown RBP10.86□□□□□ -0.67
PRPF39-202ENST00000424478 IGKV1-16P04430 117 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 CTSDP07339 412 aaPredicted RBP10.86□□□□□ -0.67
PRPF39-202ENST00000424478 CD34P28906 385 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 UBE2E1P51965 193 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 KCTD9Q7L273 389 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 RPEQ96AT9 228 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 MARVELD1Q9BSK0 173 aa10.86□□□□□ -0.67
PRPF39-202ENST00000424478 FCGR3BO75015 233 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 CD99P14209 185 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 FAM120AOSQ5T036 256 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 DUX5Q96PT3 197 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 TNCP24821 2201 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 MPPED1O15442 326 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 DUTP33316 252 aaKnown RBP10.85□□□□□ -0.67
PRPF39-202ENST00000424478 RAB7AP51149 207 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 DHRS2Q13268 280 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms