RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 RPLP1P05386 114 aaKnown RBP11.92□□□□□ -0.5
USB1-202ENST00000423271 FCGR3AP08637 254 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 GSTP1P09211 210 aaKnown RBP11.92□□□□□ -0.5
USB1-202ENST00000423271 HOXD3P31249 432 aaPredicted RBP11.92□□□□□ -0.5
USB1-202ENST00000423271 OR3A3P47888 321 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 HLA-DRB3P79483 266 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 ARFRP1Q13795 201 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 ARL6IP1Q15041 203 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 ZNF260Q3ZCT1 412 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 UBE2NLQ5JXB2 153 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 HACD4Q5VWC8 232 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 OR8H1Q8NGG4 311 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 NUDCD2Q8WVJ2 157 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 IL1F10Q8WWZ1 152 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 MAFIPQ8WZ33 124 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 GALMQ96C23 342 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 RITA1Q96K30 269 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 YPEL2Q96QA6 119 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 NABP2Q9BQ15 211 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 IFI27L2Q9H2X8 130 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 ZFP57Q9NU63 452 aa11.92□□□□□ -0.5
USB1-202ENST00000423271 SAA2-SAA4A0A096LPE2 208 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 A0A0A6YYH2 397 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 A6NJ64 397 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 K7EIL1 84 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 NOL3O60936 208 aaKnown RBP11.91□□□□□ -0.5
USB1-202ENST00000423271 SCTP09683 121 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 SAA2P0DJI9 122 aaPredicted RBP11.91□□□□□ -0.5
USB1-202ENST00000423271 ZNF182P17025 639 aaPredicted RBP11.91□□□□□ -0.5
USB1-202ENST00000423271 CNTFRP26992 372 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 SOX6P35712 828 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 TALDO1P37837 337 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 CFHR3Q02985 330 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 MMDQ15546 238 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 PNLIPRP3Q17RR3 467 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 TEX38Q6PEX7 206 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 ZNF833PQ6ZTB9 187 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 ZNF695Q8IW36 515 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 ACOT12Q8WYK0 555 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 P2RX4Q99571 388 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 PARP12Q9H0J9 701 aaKnown RBP11.91□□□□□ -0.5
USB1-202ENST00000423271 DIABLOQ9NR28 239 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 ZNF230Q9UIE0 474 aaPredicted RBP11.91□□□□□ -0.5
USB1-202ENST00000423271 MGAT4AQ9UM21 535 aa11.91□□□□□ -0.5
USB1-202ENST00000423271 WI2-2373I1.2A0A1W2PRP0 233 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 TRDCB7Z8K6 153 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 ST8SIA5O15466 376 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 SSX5O60225 188 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 RGS11O94810 467 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 DUS4LO95620 317 aaKnown RBP11.9□□□□□ -0.5
USB1-202ENST00000423271 EIF4EP06730 217 aaKnown RBP11.9□□□□□ -0.5
USB1-202ENST00000423271 MYCNOSP40205 109 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 ACTBP60709 375 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 DEFB136Q30KP8 78 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 LY6G6FQ5SQ64 297 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 OR2AK2Q8NG84 335 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 S100A16Q96FQ6 103 aaKnown RBP11.9□□□□□ -0.5
USB1-202ENST00000423271 RAX2Q96IS3 184 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 AUNIPQ9H7T9 357 aa11.9□□□□□ -0.5
USB1-202ENST00000423271 ZNF107Q9UII5 783 aaPredicted RBP11.9□□□□□ -0.5
USB1-202ENST00000423271 IGKV1-6A0A0C4DH72 117 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 CCDC160A6NGH7 325 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 XRCC3O43542 346 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 HPGDSO60760 199 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 PTHLHP12272 177 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 VDAC1P21796 283 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 SLC6A1P30531 599 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 GNG2P59768 71 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 EGFEM1PQ0D2K5 195 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 FOXE3Q13461 319 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 CXorf66Q5JRM2 361 aaPredicted RBP11.89□□□□□ -0.51
USB1-202ENST00000423271 MZT2AQ6P582 158 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 RNF152Q8N8N0 203 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 DYNC2LI1Q8TCX1 351 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 AP3S1Q92572 193 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 GON7Q9BXV9 100 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 RBM38Q9H0Z9 239 aaKnown RBP11.89□□□□□ -0.51
USB1-202ENST00000423271 OR1A1Q9P1Q5 309 aa11.89□□□□□ -0.51
USB1-202ENST00000423271 IGKV1D-8A0A087WSZ0 117 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 FABP7O15540 132 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 IGHG4P01861 327 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 APOA1P02647 267 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 IGF1P05019 195 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 ELANEP08246 267 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 GSTT2P0CG29 244 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 GSTT2BP0CG30 244 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 ELK1P19419 428 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 DTYMKP23919 212 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 TAS2R20P59543 309 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 PITPNAQ00169 270 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 KIR2DS1Q14954 304 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 RPL39P5Q59GN2 51 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 TMEM69Q5SWH9 247 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 OR4A4PQ8NGN8 299 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 CMTM3Q96MX0 182 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 ZNF251Q9BRH9 671 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 CCDC59Q9P031 241 aaKnown RBP11.88□□□□□ -0.51
USB1-202ENST00000423271 SLC23A1Q9UHI7 598 aa11.88□□□□□ -0.51
USB1-202ENST00000423271 G3V318 75 aa11.87□□□□□ -0.51
USB1-202ENST00000423271 CCL24O00175 119 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms