RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 GLDNQ6ZMI3 551 aaPredicted RBP8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 ABHD5Q8WTS1 349 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 TMEM203Q969S6 136 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 PTX4Q96A99 478 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 ABHD14BQ96IU4 210 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 GFI1Q99684 422 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 HDHD3Q9BSH5 251 aaPredicted RBP8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 C11orf54Q9H0W9 315 aaPredicted RBP8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 OR1A1Q9P1Q5 309 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 FBXO7Q9Y3I1 522 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 SORL1Q92673 2214 aa8.96□□□□□ -0.98
SQSTM1-203ENST00000422245 ERICH4A6NGS2 130 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 LINC01619G3V211 115 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 RGS10O43665 173 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 SOX15O60248 233 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 LY86O95711 162 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 APOA2P02652 100 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 CPEP16870 476 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 CEACAM6P40199 344 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 AQP4P55087 323 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 RPS25P62851 125 aaKnown RBP8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 MLLT11Q13015 90 aaPredicted RBP8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 ACTBL2Q562R1 376 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 TMEM91Q6ZNR0 172 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 PDPNQ86YL7 162 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 OR56B1Q8NGI3 324 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 DCUN1D4Q92564 292 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 TSNAXQ99598 290 aaKnown RBP8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 CMSS1Q9BQ75 279 aaKnown RBP8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 TOLLIPQ9H0E2 274 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 DUSP21Q9H596 190 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 Q9N2K0 584 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 METTL1Q9UBP6 276 aaKnown RBP8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 ZNF221Q9UK13 617 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 A3GALT2U3KPV4 340 aa8.95□□□□□ -0.98
SQSTM1-203ENST00000422245 SAP30O75446 220 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 TFAP2AP05549 437 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 CALRP27797 417 aaKnown RBP8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 CD40LGP29965 261 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 SERPINB10P48595 397 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 VEGFCP49767 419 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 PSG5Q15238 335 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 AKIRIN2Q53H80 203 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 UNQ5815/PRO19632Q6UWF5 114 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 ZNF562Q6V9R5 426 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 PPP1R27Q86WC6 154 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 FAM3DQ96BQ1 224 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 ARHGAP5-AS1Q96IT6 56 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 PECRQ9BY49 303 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 ALX4Q9H161 411 aaPredicted RBP8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 SLA2Q9H6Q3 261 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 ACOT13Q9NPJ3 140 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 AK6Q9Y3D8 172 aaKnown RBP8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 NUBP2Q9Y5Y2 271 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 SMAD5-AS1Q9Y6J3 95 aa8.94□□□□□ -0.98
SQSTM1-203ENST00000422245 TRDCB7Z8K6 153 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 FCN1O00602 326 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 ARPC1BO15143 372 aaKnown RBP8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 DIRAS3O95661 229 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 CA2P00918 260 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 IGKV1-16P04430 117 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 SCTP09683 121 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 OR8U9P0C7N5 309 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 EGR2P11161 476 aaPredicted RBP8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 PSMD7P51665 324 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 SLURP1P55000 103 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 TMEM50BP56557 158 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 TPPP2P59282 170 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 MRPS15P82914 257 aaKnown RBP8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 PRSS48Q7RTY5 328 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 ZNF383Q8NA42 475 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 DRAXINQ8NBI3 349 aaPredicted RBP8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 OR4A4PQ8NGN8 299 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 OR6Q1Q8NGQ2 317 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 ARPC1AQ92747 370 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 DLX4Q92988 240 aaPredicted RBP8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 FLYWCH2Q96CP2 140 aaKnown RBP8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 MGLLQ99685 303 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 FAM103A1Q9BTL3 118 aaKnown RBP8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 CCDC90BQ9GZT6 254 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 RDH8Q9NYR8 311 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 NKX1-2Q9UD57 310 aaPredicted RBP8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 GAB2Q9UQC2 676 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 V9GY05 133 aa8.93□□□□□ -0.98
SQSTM1-203ENST00000422245 RYR3Q15413 4870 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 IGHV4OR15-8A0A075B7B6 117 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 A0A087WW49 117 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 IGKV1-6A0A0C4DH72 117 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 H3BUA1 57 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 M0R1X1 148 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 LDLRAD4O15165 306 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 FABP7O15540 132 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 DENRO43583 198 aaKnown RBP8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 CD3GP09693 182 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 CRHBPP24387 322 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 CLDN12P56749 244 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 RPS16P62249 146 aaKnown RBP8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 PITPNAQ00169 270 aa8.92□□□□□ -0.98
SQSTM1-203ENST00000422245 FABP5Q01469 135 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms