RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ZNF573Q86YE8 665 aa14.09□□□□□ -0.15
PKP4-204ENST00000421462 OR1L1Q8NH94 360 aa14.09□□□□□ -0.15
PKP4-204ENST00000421462 OR2J1Q9GZK6 312 aa14.09□□□□□ -0.15
PKP4-204ENST00000421462 TRAPPC2LQ9UL33 140 aa14.09□□□□□ -0.15
PKP4-204ENST00000421462 RAMP3O60896 148 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 CTXN2P0C2S0 81 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 FRMD6-AS1P0C7T7 363 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 BRS3P32247 399 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 ZNF585BQ52M93 769 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 LINC01551Q86U37 167 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 C11orf42Q8N5U0 333 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 WDYHV1Q96HA8 205 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 TMEM106BQ9NUM4 274 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 RARRES3Q9UL19 164 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 SLC17A3O00476 420 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 SERF1AO75920 110 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 LIFP15018 202 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 SRP14P37108 136 aaKnown RBP14.08□□□□□ -0.16
PKP4-204ENST00000421462 LINC00205P59089 165 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 HIPK2Q9H2X6 1198 aa14.08□□□□□ -0.16
PKP4-204ENST00000421462 A0A0G2JMM0 328 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 A0A1W2PPB8 328 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 A0A1W2PRS3 328 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 KIR3DP1A8MWS1 328 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 RBFOX2O43251 390 aaKnown RBP eCLIP14.07□□□□□ -0.161e-8■□□□□ 10.8
PKP4-204ENST00000421462 ZG16O60844 167 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 COX5AP20674 150 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 GNB1P62873 340 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 Q6ZVH6 145 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 RHBDL1O75783 438 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 GNG10P50151 68 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 MMDQ15546 238 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 BTF3L4Q96K17 158 aa14.07□□□□□ -0.16
PKP4-204ENST00000421462 MDFIC2A0A1B0GVS7 189 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 KITLGP21583 273 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 RPL15P61313 204 aaKnown RBP14.06□□□□□ -0.16
PKP4-204ENST00000421462 ZNF90Q03938 601 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 SPATA46Q5T0L3 261 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 NUFIP2Q7Z417 695 aaKnown RBP14.06□□□□□ -0.16
PKP4-204ENST00000421462 RNF138Q8WVD3 245 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 PXMP4Q9Y6I8 212 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 TRAV24A0A0B4J272 114 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 EN2P19622 333 aaPredicted RBP14.06□□□□□ -0.16
PKP4-204ENST00000421462 DSCR4P56555 118 aaPredicted RBP14.06□□□□□ -0.16
PKP4-204ENST00000421462 RABEPKQ7Z6M1 372 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 OR10P1Q8NGE3 313 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 MIEN1Q9BRT3 115 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 DNAJC4Q9NNZ3 241 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 FOXJ2Q9P0K8 574 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 CDC34P49427 236 aaPredicted RBP14.06□□□□□ -0.16
PKP4-204ENST00000421462 FOXG1P55316 489 aaPredicted RBP14.06□□□□□ -0.16
PKP4-204ENST00000421462 SLC35B1P78383 322 aa14.06□□□□□ -0.16
PKP4-204ENST00000421462 WIPI1Q5MNZ9 446 aaPredicted RBP14.06□□□□□ -0.16
PKP4-204ENST00000421462 DMDP11532 3685 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 F6UZH7 168 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 CRISP2P16562 243 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 TPPP2P59282 170 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 KIAA1644Q3SXP7 199 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 C19orf25Q9UFG5 118 aaPredicted RBP14.05□□□□□ -0.16
PKP4-204ENST00000421462 PI4KAP42356 2102 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 M0QZK8 103 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 DEGS1O15121 323 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 SLC25A6P12236 298 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 CD82P27701 267 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 NXPH1P58417 271 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 RAC1P63000 192 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 CPT1CQ8TCG5 803 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 PLPPR2Q96GM1 343 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 GPR35Q9HC97 309 aa14.05□□□□□ -0.16
PKP4-204ENST00000421462 IGLV3-12A0A075B6K2 115 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 A0A1W2PPV4 95 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 AQP7O14520 342 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 IGLV2-14P01704 120 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 SOX8P57073 446 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 MRPS11P82912 194 aaKnown RBP14.04□□□□□ -0.16
PKP4-204ENST00000421462 TMEM183BQ1AE95 376 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 OR5A2Q8NGI9 324 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 NPCDR1Q9BY65 106 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 DLL3Q9NYJ7 618 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 C2CD4DB7Z1M9 353 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 CA6P23280 308 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 IER3P46695 156 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 HOXA4Q00056 320 aaPredicted RBP14.04□□□□□ -0.16
PKP4-204ENST00000421462 GUSBP11Q6P575 273 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 CENPVQ7Z7K6 275 aaPredicted RBP14.04□□□□□ -0.16
PKP4-204ENST00000421462 DRAM1Q8N682 238 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 OR10D3Q8NH80 312 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 SFRP2Q96HF1 295 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 PRRG4Q9BZD6 226 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 PPP1R14DQ9NXH3 145 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 MRPS18CQ9Y3D5 142 aaKnown RBP14.04□□□□□ -0.16
PKP4-204ENST00000421462 RFPL3SP0C7P2 107 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 RAB7AP51149 207 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 ATOH7Q8N100 152 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 OR5AU1Q8NGC0 362 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 CIB3Q96Q77 187 aaPredicted RBP14.04□□□□□ -0.16
PKP4-204ENST00000421462 RIMS4Q9H426 269 aaPredicted RBP14.04□□□□□ -0.16
PKP4-204ENST00000421462 PROK2Q9HC23 129 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 ELOVL5Q9NYP7 299 aa14.04□□□□□ -0.16
PKP4-204ENST00000421462 PRR14LQ5THK1 2151 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms