RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 TBC1D26Q86UD7 250 aa17.51■□□□□ 0.39
ABCF3-202ENST00000421340 C5orf30Q96GV9 206 aa17.51■□□□□ 0.39
ABCF3-202ENST00000421340 ADTRPQ96IZ2 230 aa17.51■□□□□ 0.39
ABCF3-202ENST00000421340 BEX2Q9BXY8 128 aa17.51■□□□□ 0.39
ABCF3-202ENST00000421340 BEX1Q9HBH7 125 aa17.51■□□□□ 0.39
ABCF3-202ENST00000421340 FAM212BQ9NTI7 297 aaPredicted RBP17.51■□□□□ 0.39
ABCF3-202ENST00000421340 ITGB1BP2Q9UKP3 347 aa17.51■□□□□ 0.39
ABCF3-202ENST00000421340 MINOS1-NBL1R4GNA1 71 aa17.51■□□□□ 0.39
ABCF3-202ENST00000421340 CSMD2Q7Z408 3487 aa17.51■□□□□ 0.39
ABCF3-202ENST00000421340 A0A0B4J293 547 aa17.5■□□□□ 0.39
ABCF3-202ENST00000421340 LEUTXA8MZ59 168 aa17.5■□□□□ 0.39
ABCF3-202ENST00000421340 LY6LH3BQJ8 138 aa17.5■□□□□ 0.39
ABCF3-202ENST00000421340 ARG1P05089 322 aa17.5■□□□□ 0.39
ABCF3-202ENST00000421340 ANXA3P12429 323 aa17.5■□□□□ 0.39
ABCF3-202ENST00000421340 F2RP25116 425 aa17.5■□□□□ 0.39
ABCF3-202ENST00000421340 HTR1DP28221 377 aa17.5■□□□□ 0.39
ABCF3-202ENST00000421340 DUTP33316 252 aaKnown RBP17.5■□□□□ 0.39
ABCF3-202ENST00000421340 DLX1P56177 255 aa17.5■□□□□ 0.39
ABCF3-202ENST00000421340 DHRS2Q13268 280 aa17.5■□□□□ 0.39
ABCF3-202ENST00000421340 MIDNQ504T8 468 aa17.5■□□□□ 0.39
ABCF3-202ENST00000421340 CIARTQ8N365 385 aaPredicted RBP17.5■□□□□ 0.39
ABCF3-202ENST00000421340 ZNF431Q8TF32 576 aaPredicted RBP17.5■□□□□ 0.39
ABCF3-202ENST00000421340 DPM3Q9P2X0 92 aa17.5■□□□□ 0.39
ABCF3-202ENST00000421340 TBL2Q9Y4P3 447 aaKnown RBP17.5■□□□□ 0.39
ABCF3-202ENST00000421340 A0A0A6YYJ9 748 aa17.49■□□□□ 0.39
ABCF3-202ENST00000421340 C3orf85A0A1B0GTC6 90 aa17.49■□□□□ 0.39
ABCF3-202ENST00000421340 DUS4LO95620 317 aaKnown RBP17.49■□□□□ 0.39
ABCF3-202ENST00000421340 IFNA2P01563 188 aa17.49■□□□□ 0.39
ABCF3-202ENST00000421340 HLA-AP01891 365 aaKnown RBP17.49■□□□□ 0.39
ABCF3-202ENST00000421340 CEACAM3P40198 252 aa17.49■□□□□ 0.39
ABCF3-202ENST00000421340 TAGLNQ01995 201 aaKnown RBP17.49■□□□□ 0.39
ABCF3-202ENST00000421340 CATR1Q13166 79 aa17.49■□□□□ 0.39
ABCF3-202ENST00000421340 RPL39P5Q59GN2 51 aa17.49■□□□□ 0.39
ABCF3-202ENST00000421340 C1orf229Q6ZS94 237 aaPredicted RBP17.49■□□□□ 0.39
ABCF3-202ENST00000421340 LHX4Q969G2 390 aa17.49■□□□□ 0.39
ABCF3-202ENST00000421340 ZNRD1Q9P1U0 126 aa17.49■□□□□ 0.39
ABCF3-202ENST00000421340 ALG5Q9Y673 324 aa17.49■□□□□ 0.39
ABCF3-202ENST00000421340 A0A0B4J2A0 478 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 CENPVL3A0A0U1RRI6 287 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 OOSP1A8MZH6 123 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 H0Y980 276 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 M0R1X1 148 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 TXNL1O43396 289 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 TNFSF12O43508 249 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 CREBL2O60519 120 aaPredicted RBP17.48■□□□□ 0.39
ABCF3-202ENST00000421340 VAMP1P23763 118 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 THBS3P49746 956 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 KLRD1Q13241 179 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 MITD1Q8WV92 249 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 SEC22CQ9BRL7 303 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 LIN7CQ9NUP9 197 aaKnown RBP17.48■□□□□ 0.39
ABCF3-202ENST00000421340 SHPKQ9UHJ6 478 aa17.48■□□□□ 0.39
ABCF3-202ENST00000421340 PIGBOS1A0A0B4J2F0 54 aa17.47■□□□□ 0.39
ABCF3-202ENST00000421340 GAPDHP04406 335 aaKnown RBP17.47■□□□□ 0.39
ABCF3-202ENST00000421340 LGALS4P56470 323 aa17.47■□□□□ 0.39
ABCF3-202ENST00000421340 BPIFB3P59826 476 aa17.47■□□□□ 0.39
ABCF3-202ENST00000421340 PRB3Q04118 309 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-202ENST00000421340 ZNF816Q0VGE8 651 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-202ENST00000421340 CD300LFQ8TDQ1 290 aa17.47■□□□□ 0.39
ABCF3-202ENST00000421340 TMEM222Q9H0R3 208 aa17.47■□□□□ 0.39
ABCF3-202ENST00000421340 OR51J1Q9H342 316 aa17.47■□□□□ 0.39
ABCF3-202ENST00000421340 YLPM1P49750 1951 aaKnown RBP17.47■□□□□ 0.39
ABCF3-202ENST00000421340 ARHGAP32A7KAX9 2087 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 IGHV1-69DA0A0B4J2H0 117 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 IGHV1-69P01742 117 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 CT45A6P0DMU7 189 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 CT45A5P0DMU8 189 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 CT45A7P0DMV0 189 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 EPHA1P21709 976 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 UCP1P25874 307 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 KIR2DS2P43631 304 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 RPL30P62888 115 aaKnown RBP17.46■□□□□ 0.39
ABCF3-202ENST00000421340 SRPXP78539 464 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 TMEM187Q14656 261 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 TPTE2P1Q5T6R2 138 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 TGIF2LXQ8IUE1 241 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 LRTM2Q8N967 370 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 GLYATL2Q8WU03 294 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 DDB2Q92466 427 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 MALSU1Q96EH3 234 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 PRELID3BQ9Y3B1 194 aa17.46■□□□□ 0.39
ABCF3-202ENST00000421340 LINC00473A8K010 186 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 SMAD7O15105 426 aaKnown RBP17.45■□□□□ 0.38
ABCF3-202ENST00000421340 RBFOX2O43251 390 aaKnown RBP eCLIP17.45■□□□□ 0.387e-8■□□□□ 11
ABCF3-202ENST00000421340 OR5AC1P0C628 307 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 ZNF16P17020 682 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-202ENST00000421340 GPR157Q5UAW9 335 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 SPNS3Q6ZMD2 512 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 C12orf45Q8N5I9 185 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-202ENST00000421340 TEX29Q8N6K0 151 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 OR5AN1Q8NGI8 311 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 OR52B4Q8NGK2 314 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 COQ8AQ8NI60 647 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 TCTEX1D2Q8WW35 142 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 TMEM56Q96MV1 263 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 TP53RKQ96S44 253 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 PHB2Q99623 299 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 TMEM56-RWDD3S4R434 201 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 ABCA2Q9BZC7 2435 aa17.45■□□□□ 0.38
ABCF3-202ENST00000421340 NPFFO15130 113 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms