RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 Q6ZS92 163 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 LYPD6BQ8NI32 183 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 C12orf57Q99622 126 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 MBNL3Q9NUK0 354 aaKnown RBP9.17□□□□□ -0.94
DDX56-203ENST00000421223 PTPRQQ9UMZ3 2332 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 WIPI2Q9Y4P8 454 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 MBD3L4A6NDZ8 208 aaPredicted RBP9.17□□□□□ -0.94
DDX56-203ENST00000421223 MBD3L3A6NE82 208 aaPredicted RBP9.17□□□□□ -0.94
DDX56-203ENST00000421223 MBD3L5A6NJ08 208 aaPredicted RBP9.17□□□□□ -0.94
DDX56-203ENST00000421223 FAM157AC9JC47 383 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 H7C2Y5 167 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 CEACAM4O75871 244 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 S1PR2O95136 353 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 HMGN3Q15651 99 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 MBD3L2Q8NHZ7 208 aaPredicted RBP9.17□□□□□ -0.94
DDX56-203ENST00000421223 SCGB1C1Q8TD33 95 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 ARV1Q9H2C2 271 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 KCNJ16Q9NPI9 418 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 PUS1Q9Y606 427 aaKnown RBP eCLIP9.17□□□□□ -0.94
DDX56-203ENST00000421223 PTPRBP23467 1997 aa9.17□□□□□ -0.94
DDX56-203ENST00000421223 A0A1B0GU03 582 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 SPINT2O43291 252 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 FBP1P09467 338 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 SNCAP37840 140 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 ELLP55199 621 aaPredicted RBP9.16□□□□□ -0.94
DDX56-203ENST00000421223 ODF3L1Q8IXM7 274 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 ZFP82Q8N141 532 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 CA5BP1Q8WTZ4 195 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 CLN8Q9UBY8 286 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 MLXQ9UH92 298 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 TP53TG5Q9Y2B4 290 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.16□□□□□ -0.94
DDX56-203ENST00000421223 ATXN7O15265 892 aaPredicted RBP9.16□□□□□ -0.94
DDX56-203ENST00000421223 HMGB3O15347 200 aaKnown RBP9.16□□□□□ -0.94
DDX56-203ENST00000421223 PITX3O75364 302 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 IGLV1-44P01699 117 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 CRYABP02511 175 aaKnown RBP9.16□□□□□ -0.94
DDX56-203ENST00000421223 KITLGP21583 273 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 PEA15Q15121 130 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 LCN15Q6UWW0 184 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 ASCL5Q7RTU5 278 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 RNF115Q9Y4L5 304 aa9.16□□□□□ -0.94
DDX56-203ENST00000421223 KIAA1324LA8MWY0 1029 aaPredicted RBP9.15□□□□□ -0.94
DDX56-203ENST00000421223 CCL8P80075 99 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 ARL16Q0P5N6 197 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 RTP5Q14D33 572 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 TGIF2LYQ8IUE0 185 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 VKORC1L1Q8N0U8 176 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 ISOC2Q96AB3 205 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 YLPM1P49750 1951 aaKnown RBP9.15□□□□□ -0.94
DDX56-203ENST00000421223 IGKV1D-17A0A075B6S4 117 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 DUXBA0A1W2PPF3 345 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 CLEC18AA5D8T8 446 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 CYB5R3P00387 301 aaPredicted RBP9.15□□□□□ -0.94
DDX56-203ENST00000421223 CD55P08174 381 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 FGF8P55075 233 aaPredicted RBP9.15□□□□□ -0.94
DDX56-203ENST00000421223 CASP6P55212 293 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 SELENOVP59797 346 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 SLC35E4Q6ICL7 350 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 DUX4L9Q6RFH8 374 aaPredicted RBP9.15□□□□□ -0.94
DDX56-203ENST00000421223 GCSAMQ8N6F7 178 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 ZNF645Q8N7E2 425 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 CLEC18CQ8NCF0 446 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 C5orf30Q96GV9 206 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 HES4Q9HCC6 221 aa9.15□□□□□ -0.94
DDX56-203ENST00000421223 KALRNO60229 2985 aa9.15□□□□□ -0.95
DDX56-203ENST00000421223 UMAD1C9J7I0 102 aa9.15□□□□□ -0.95
DDX56-203ENST00000421223 FCGR3BO75015 233 aa9.15□□□□□ -0.95
DDX56-203ENST00000421223 SULT1A1P50225 295 aa9.15□□□□□ -0.95
DDX56-203ENST00000421223 TIMM23BQ5SRD1 257 aa9.15□□□□□ -0.95
DDX56-203ENST00000421223 C2CD4CQ8TF44 421 aa9.15□□□□□ -0.95
DDX56-203ENST00000421223 IL22RA2Q969J5 263 aa9.15□□□□□ -0.95
DDX56-203ENST00000421223 ZDHHC16Q969W1 377 aa9.15□□□□□ -0.95
DDX56-203ENST00000421223 RAB40CQ96S21 281 aa9.15□□□□□ -0.95
DDX56-203ENST00000421223 ATP5SQ99766 215 aa9.15□□□□□ -0.95
DDX56-203ENST00000421223 MRPL37Q9BZE1 423 aaKnown RBP9.15□□□□□ -0.95
DDX56-203ENST00000421223 C11orf1Q9H5F2 150 aa9.15□□□□□ -0.95
DDX56-203ENST00000421223 UBE2L5PA0A1B0GUS4 154 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 RNF212BA8MTL3 300 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 CEBPZOSA8MTT3 80 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 PRRG2O14669 202 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 GPR12P47775 334 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 OR2B8PP59922 312 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 CATR1Q13166 79 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 PRR30Q53SZ7 412 aaPredicted RBP9.14□□□□□ -0.95
DDX56-203ENST00000421223 GFRALQ6UXV0 394 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 H2BFWTQ7Z2G1 175 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 RXFP4Q8TDU9 374 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 LRFN3Q9BTN0 628 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 WASF3Q9UPY6 502 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 STRAPQ9Y3F4 350 aaKnown RBP9.14□□□□□ -0.95
DDX56-203ENST00000421223 LINC00473A8K010 186 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 UBE2KP61086 200 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 RPL39P5Q59GN2 51 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 UTF1Q5T230 341 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 MBNL2Q5VZF2 373 aaKnown RBP9.14□□□□□ -0.95
DDX56-203ENST00000421223 C14orf79Q96F83 325 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 MEGF10Q96KG7 1140 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 PBDC1Q9BVG4 233 aa9.14□□□□□ -0.95
DDX56-203ENST00000421223 VSIRQ9H7M9 311 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms