RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 TENM1Q9UKZ4 2725 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 J3QRK9 145 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 CTXN2P0C2S0 81 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 BLCAPP62952 87 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 EBI3Q14213 229 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 TMEM95Q3KNT9 176 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 FAM131AQ6UXB0 335 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 GLDNQ6ZMI3 551 aaPredicted RBP9.95□□□□□ -0.82
SKA1-203ENST00000417656 Q6ZS46 218 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 Q8N6K4 173 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 C3orf56Q8N813 242 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 OR2T10Q8NGZ9 312 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 OR2T6Q8NHC8 308 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 GPX8Q8TED1 209 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 WFDC12Q8WWY7 111 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 ADAM30Q9UKF2 790 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 RNF114Q9Y508 228 aa9.95□□□□□ -0.82
SKA1-203ENST00000417656 RBM7Q9Y580 266 aaKnown RBP9.95□□□□□ -0.82
SKA1-203ENST00000417656 A0A1B0GUS0 222 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 M0R1X1 148 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 PROP1O75360 226 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 MOSP00540 346 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 AMY1AP04745 511 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 AMY2AP04746 511 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 CT45A6P0DMU7 189 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 CT45A5P0DMU8 189 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 CT45A7P0DMV0 189 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 PROK1P58294 105 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 ABCA11PQ4W5N1 156 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 ARSJQ5FYB0 599 aaPredicted RBP9.94□□□□□ -0.82
SKA1-203ENST00000417656 Q8N2B8 174 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 C5orf56Q8N8D9 126 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 DRAXINQ8NBI3 349 aaPredicted RBP9.94□□□□□ -0.82
SKA1-203ENST00000417656 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.94□□□□□ -0.82
SKA1-203ENST00000417656 MCFD2Q8NI22 146 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 PRSS22Q9GZN4 317 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 GHITMQ9H3K2 345 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 SCPEP1Q9HB40 452 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 NECAP2Q9NVZ3 263 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 SDHAF2Q9NX18 166 aa9.94□□□□□ -0.82
SKA1-203ENST00000417656 IGKV1D-13A0A0B4J2D9 117 aa9.93□□□□□ -0.82
SKA1-203ENST00000417656 H0YJW9 148 aa9.93□□□□□ -0.82
SKA1-203ENST00000417656 ZNF701M0R085 212 aaPredicted RBP9.93□□□□□ -0.82
SKA1-203ENST00000417656 TUSC2O75896 110 aa9.93□□□□□ -0.82
SKA1-203ENST00000417656 IGKV1-13P0DP09 117 aa9.93□□□□□ -0.82
SKA1-203ENST00000417656 LINC00205P59089 165 aa9.93□□□□□ -0.82
SKA1-203ENST00000417656 CDK10Q15131 360 aa9.93□□□□□ -0.82
SKA1-203ENST00000417656 C9orf152Q5JTZ5 239 aa9.93□□□□□ -0.82
SKA1-203ENST00000417656 ZNF383Q8NA42 475 aa9.93□□□□□ -0.82
SKA1-203ENST00000417656 OR5AP2Q8NGF4 316 aa9.93□□□□□ -0.82
SKA1-203ENST00000417656 NXF2Q9GZY0 626 aaKnown RBP9.93□□□□□ -0.82
SKA1-203ENST00000417656 EHFQ9NZC4 300 aa9.93□□□□□ -0.82
SKA1-203ENST00000417656 OR2W1Q9Y3N9 320 aa9.93□□□□□ -0.82
SKA1-203ENST00000417656 ANK2Q01484 3957 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 OR5H14A6NHG9 310 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 NCBP2LA6PVI3 153 aaKnown RBP9.92□□□□□ -0.82
SKA1-203ENST00000417656 M0QZK8 103 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 FGF16O43320 207 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 PMP2P02689 132 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 OR5H8P0DN80 308 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 NAT1P18440 290 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 AADACP22760 399 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 FCGR2CP31995 323 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 RCVRNP35243 200 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 VDAC2P45880 294 aaPredicted RBP9.92□□□□□ -0.82
SKA1-203ENST00000417656 LUMP51884 338 aaPredicted RBP9.92□□□□□ -0.82
SKA1-203ENST00000417656 TAS2R46P59540 309 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 KRTAP10-3P60369 221 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 ACTBP60709 375 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 SRSF4Q08170 494 aaKnown RBP9.92□□□□□ -0.82
SKA1-203ENST00000417656 FOXB2Q5VYV0 432 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 C11orf88Q6PI97 169 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 KLHDC1Q8N7A1 406 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 Q8N9W7 124 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 OR5H2Q8NGV7 314 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 DIRAS2Q96HU8 199 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 ABHD1Q96SE0 405 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 ZNF747Q9BV97 191 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 SERTAD4Q9NUC0 356 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 WASHC3Q9Y3C0 194 aa9.92□□□□□ -0.82
SKA1-203ENST00000417656 DPPA5A6NC42 116 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 H7C2Y5 167 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 SULT1C2O00338 296 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 PPYP01298 95 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 APOA2P02652 100 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 CNTFRP26992 372 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 HLA-DMAP28067 261 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 HRH1P35367 487 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 F2RL1P55085 397 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 FXYD4P59646 89 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 DGCR2P98153 550 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 IL18Q14116 193 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 MMDQ15546 238 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 ZNF645Q8N7E2 425 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 OR5AN1Q8NGI8 311 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 OR52I2Q8NH67 350 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 RITA1Q96K30 269 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 PLSCR3Q9NRY6 295 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 GAB2Q9UQC2 676 aa9.91□□□□□ -0.82
SKA1-203ENST00000417656 TPPPO94811 219 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms