RNA–Protein interactions for RNA: ENST00000416417.5

USP4-204, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2 BASIC

Gene USP4, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-204ENST00000416417 MND1Q9BWT6 205 aa8.92□□□□□ -0.98
USP4-204ENST00000416417 WASHC3Q9Y3C0 194 aa8.92□□□□□ -0.98
USP4-204ENST00000416417 AK6Q9Y3D8 172 aaKnown RBP8.92□□□□□ -0.98
USP4-204ENST00000416417 LRRC42Q9Y546 428 aa8.92□□□□□ -0.98
USP4-204ENST00000416417 IGKV1-6A0A0C4DH72 117 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 HSPA12AO43301 675 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 IGKV1-16P04430 117 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 CD3GP09693 182 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 UCHL1P09936 223 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 FRMD6-AS1P0C7T7 363 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 GP9P14770 177 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 VEGFCP49767 419 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 INSL3P51460 131 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 CRIP2P52943 208 aaPredicted RBP8.91□□□□□ -0.98
USP4-204ENST00000416417 TMEM50BP56557 158 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 TPPP2P59282 170 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 HLA-DRB3P79483 266 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 SPHARQ15513 63 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 ACTBL2Q562R1 376 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 TMEM91Q6ZNR0 172 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 ZNF429Q86V71 674 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 MS4A15Q8N5U1 240 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 ZNF383Q8NA42 475 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 GRPEL2Q8TAA5 225 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 PHYHIPQ92561 330 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 THRSPQ92748 146 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 RCHY1Q96PM5 261 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 PLGRKTQ9HBL7 147 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 C8orf4Q9NR00 106 aa8.91□□□□□ -0.98
USP4-204ENST00000416417 OR5H14A6NHG9 310 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 ARPC1BO15143 372 aaKnown RBP8.9□□□□□ -0.98
USP4-204ENST00000416417 BPNT1O95861 308 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 HSMCR30P0CW71 290 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 CPEP16870 476 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 RPS16P62249 146 aaKnown RBP8.9□□□□□ -0.98
USP4-204ENST00000416417 FAM71F2Q6NXP2 309 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 ACSM6Q6P461 480 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 OR5T1Q8NG75 326 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 OR5AN1Q8NGI8 311 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 OR6M1Q8NGM8 313 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 ARHGAP5-AS1Q96IT6 56 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 PECRQ9BY49 303 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 Q9N2K0 584 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 ZNF355PQ9NSJ1 428 aa8.9□□□□□ -0.98
USP4-204ENST00000416417 ANKRD34BA5PLL1 514 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 FOXI3A8MTJ6 420 aaPredicted RBP8.9□□□□□ -0.99
USP4-204ENST00000416417 CASQ2O14958 399 aaPredicted RBP8.9□□□□□ -0.99
USP4-204ENST00000416417 SLC25A17O43808 307 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 TRGV3P03979 118 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 HSPB1P04792 205 aaKnown RBP8.9□□□□□ -0.99
USP4-204ENST00000416417 CD37P11049 281 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 ARSBP15848 533 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 ZBTB25P24278 435 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 MC5RP33032 325 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 PJVKQ0ZLH3 352 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 MOB1BQ7L9L4 216 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 MAFIPQ8WZ33 124 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 RHOVQ96L33 236 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 RSRP1Q9BUV0 290 aa8.9□□□□□ -0.99
USP4-204ENST00000416417 NKX1-2Q9UD57 310 aaPredicted RBP8.9□□□□□ -0.99
USP4-204ENST00000416417 TRBV6-6A0A0A6YYG2 114 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 M0R1X1 148 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 SLC17A2O00624 439 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 APELAP0DMC3 54 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 SSBP2P81877 361 aaPredicted RBP8.89□□□□□ -0.99
USP4-204ENST00000416417 PITPNAQ00169 270 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 TMEM267Q0VDI3 215 aaPredicted RBP8.89□□□□□ -0.99
USP4-204ENST00000416417 IRF3Q14653 427 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 FXYD3Q14802 87 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 RAB11BQ15907 218 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 PLAC9Q5JTB6 97 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 CD200R1LQ6Q8B3 271 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 ZNF562Q6V9R5 426 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 FAM89BQ8N5H3 189 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 MUC7Q8TAX7 377 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 UFD1Q92890 307 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 CMSS1Q9BQ75 279 aaKnown RBP8.89□□□□□ -0.99
USP4-204ENST00000416417 URM1Q9BTM9 101 aaKnown RBP8.89□□□□□ -0.99
USP4-204ENST00000416417 RDH8Q9NYR8 311 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 ZNF221Q9UK13 617 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 ADAM30Q9UKF2 790 aa8.89□□□□□ -0.99
USP4-204ENST00000416417 STAB2Q8WWQ8 2551 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 C3orf84H3BNL1 204 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 BET1O15155 118 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 MAP2K4P45985 399 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 MOGAT2Q3SYC2 334 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 AKIRIN2Q53H80 203 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 CASC10Q5T4H9 136 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 HES5Q5TA89 166 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 RNLSQ5VYX0 342 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 TCTEX1D1Q8N7M0 179 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 OR6Q1Q8NGQ2 317 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 C5orf30Q96GV9 206 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 OR4C12Q96R67 309 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 GHITMQ9H3K2 345 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 C12orf4Q9NQ89 552 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 SLC35D1Q9NTN3 355 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 SCN3BQ9NY72 215 aa8.88□□□□□ -0.99
USP4-204ENST00000416417 ITGB1BP1O14713 200 aa8.87□□□□□ -0.99
USP4-204ENST00000416417 RBBP9O75884 186 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms