RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 LANCL3Q6ZV70 420 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 MOB3BQ86TA1 216 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 TMEM150AQ86TG1 271 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 NAA40Q86UY6 237 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CBLN2Q8IUK8 224 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF584Q8IVC4 421 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 KIR2DL5AQ8N109 375 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC39A11Q8N1S5 342 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 LRRC18Q8N456 261 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 BPIFB2Q8N4F0 458 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 JAGN1Q8N5M9 183 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF433Q8N7K0 673 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 UBAC2Q8NBM4 344 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 RELL2Q8NC24 303 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF740Q8NDX6 193 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CCDC54Q8NEL0 328 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR4E2Q8NGC2 313 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR5L2Q8NGL0 311 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR6K2Q8NGY2 324 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR2G2Q8NGZ5 317 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 KIR2DL5BQ8NHK3 375 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 WFDC5Q8TCV5 224 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 HIST1H2BAQ96A08 127 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 FAM3DQ96BQ1 224 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 S100PBPQ96BU1 408 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 NUS1Q96E22 293 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 SEH1LQ96EE3 360 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 TBX5Q99593 518 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CDCA3Q99618 268 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 PDCD1LG2Q9BQ51 273 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CMSS1Q9BQ75 279 aaKnown RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 SULT4A1Q9BR01 284 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 C2orf88Q9BSF0 95 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 DDA1Q9BW61 102 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ATG5Q9H1Y0 275 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ARV1Q9H2C2 271 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CXXC4Q9H2H0 198 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF430Q9H8G1 570 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 RETNQ9HD89 108 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CYTL1Q9NRR1 136 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ASF1BQ9NVP2 202 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 TMEM242Q9NWH2 141 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 CACFD1Q9UGQ2 172 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 RAB22AQ9UL26 194 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 NOP16Q9Y3C1 178 aaKnown RBP2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 FLVCR1Q9Y5Y0 555 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 MTCH2Q9Y6C9 303 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 ANAPC1Q9H1A4 1944 aa2.93□□□□□ -1.94
HMGB3P23-201ENST00000414981 NINQ8N4C6 2090 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 DENND4AQ7Z401 1863 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 MTCL1Q9Y4B5 1905 aaKnown RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 A0A087WUJ7 227 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 BORCS7-ASMTA0A0B4J1R7 106 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 A0A1W2PRF3 423 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 A0A1W2PRM7 423 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 TMEM72A0PK05 275 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF705EA8MWA4 302 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 C21orf140B9A014 251 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 G3V4G9 280 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 TSTD3H0UI37 97 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 RPL36A-HNRNPH2H7BZ11 118 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 SIRPB1O00241 398 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 DCTN6O00399 190 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 SH2D1BO14796 132 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 ERI3O43414 337 aaKnown RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 PPIHO43447 177 aaKnown RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 MBTPS2O43462 519 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 SFT2D2O95562 160 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 RENP00797 406 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 TIMP1P01033 207 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 HCKP08631 526 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 SFTA3P0C7M3 94 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 SLC35G4P0C7Q5 338 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 HIST1H1CP16403 213 aaKnown RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 IGFBP3P17936 291 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 AADACP22760 399 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 S100A2P29034 98 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 CMPK1P30085 196 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 GPX4P36969 197 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 RPL13AP40429 203 aaKnown RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 OR3A2P47893 321 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 RBP2P50120 134 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 PKIAP61925 76 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 TLE4Q04727 773 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 FABP9Q0Z7S8 132 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 IL15RAQ13261 267 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 ACTL10Q5JWF8 245 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 FAM74A1Q5RGS3 127 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 MRPL2Q5T653 305 aaKnown RBP2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 FHL5Q5TD97 284 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 LINC01590Q5TEZ4 76 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF774Q6NX45 483 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 BTNL3Q6UXE8 466 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 DPPA3Q6W0C5 159 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 RFLNAQ6ZTI6 216 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 COX15Q7KZN9 410 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 SSX6Q7RTT6 188 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 COX8CQ7Z4L0 72 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 ANKRD37Q7Z713 158 aa2.92□□□□□ -1.94
HMGB3P23-201ENST00000414981 ZNF547Q8IVP9 402 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms